| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1115 |
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| Symbol | |
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| ID | 4909647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1047420 |
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| End bp | 1049210 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124869 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_001056006 |
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| Protein GI | 126459728 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACTCA TCGTCGCCGA GAAGCGGTCG GTGGCTAAGG CAATAGCCCA GTTCCTCGGC
GGAAGCTACA GAGCCCAAAG GGTCTACGGC GTCCCAGCGT ACTTCTTCAA CTACGGCGGC
GAGGCCGTCA GCCTGGGCCT CATGGGCCAC ATCATGGACT TCGACTTCGC GGCGCGTGAA
AACGTGTGGA CTTGGATACC CCCCGAGCAA CTCTTTCACG CCACTCCGCT CCTCGTCATA
CGCGACGAGG CGGCGCAGTA CGTCAAGGCG CTTCAGTCCC TCGCACGAAG GGCAGACGAG
GTTTACCTCG CCCTAGACGC CGACGTGGAG GGAGAGGCTA TAGCCTACGA GGCCGCCATA
GCCGTGAGGG CAGTCAACAG GAGAGCCAGG CTGTACCGAG TGAAATTTAA CGCAGTTACG
CCGAAGGACA TAAGAGCCGC CTTTCAAAAG CCCGACACAC TAAACCTCAA GCTAGTGGAG
AAGGTATTTA CCAGGATGCA GATAGACCTC ACCCTAGGCG CCGTCTTCAC AAGGGCGCTG
ACGCTCTCCG TGAGAAACTC GCTGGAGAAG GGGCAGTTTC TAAGCTACGG CCCCTGCCAG
ACGCCGGTGC TCGGCATTGT GGTCAACAGA GAGCTAGAGC GGATAAACTT CAAGCCGGAG
AAGTACTACG TAATAAAAGC CGTGGTGGAC ATAGGGGGCC ACCGGGTGGA AATGGGCTCA
GAAGTTAGGT ATAAGACTAG GGCTGAGGCA GAGGCCGCCG CCTCTCTAAT TAAGCGCGGC
GTCGTAAAAG CGGCGGTGTA CAGGCCACAC AAGGTGGAGC CCCCAGAGCC TCTGGAGACT
GTGGAGCTGG AGCGGAGAGC CAGCCGGTGG CTTGGAATAA ACTCGAAAAA GACGCTTGAC
GTGGCCGAGG AGCTCTACCG CGCCGGCTAT ATCTCATACC CAAGAACTGA GACAACCATA
TACCCCCCGA GCCTAGACCT GCGGGAGGTC CTACAAGAGC TCGCCAAGGG AGAACACGGG
GAGTACGCCA GGGGGCTACT CAAGGCCGGG TTTAGGCCCA CGAGGGGCGA CTCAGACGAC
GGCGCCCACC CGCCCATATA CCCCACCAAG GGGGCCACCA AAGACGAGTT GTACAGACGG
TTTGGAAAAG CCGCGGCATA CGCGTGGCCC ATATACGACT TCGTAGTCCG CCACTTCCTA
GCCACCCTAA GCCCCCCCGC CGTGGTGGAA AAACAGAAGA TAGTGGTCTC CTTTGGCAAA
ATTGAGCTAG AGGCAGAGGG GCAGAGAACG CTGGACGAGG GGTACTGGCG CATCTACCCC
TGGGAGAGGC AGGCGGAAAA GCCGCTTCCA GTGGTAAAGC CAGGCGAGGC GGCGTACGCG
GTCAAGGTCT CCGTAGTGGA GAGGGAGACC CAGCCACCGC CCCCAATGAC TGAGTCGGAG
CTCCTCGCGC TCATGAAGAA GTACGGCATA GGCACAGATG CCACAATGCA AGACCACATT
CACACAAACG TCAAGAGGGG CTACATGAGG CTACAGAAAG GCAAGTGTAC GCCAACGCCG
CTGGGGATGG CCCTGGCCAC CGCCCTCTTC CAATACGTCC CAGAGCTCAT TGAGCCGACC
GTCAGGGCCA AGATAGAGCG CGCACTGAAC TCAATAGTCC GAGACGGAGT GCCCCCGGCA
AAGCTGGCGG CTGAGGTAAA GGCAGAGTTC GCCAAATACT TTGAAAAACT ACAGCAACAT
CGGAGGGAGA TAAAAGAAGC CCTTGAAAAA GCTTTAAACT CTAGTCCATG A
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| Protein sequence | MKLIVAEKRS VAKAIAQFLG GSYRAQRVYG VPAYFFNYGG EAVSLGLMGH IMDFDFAARE
NVWTWIPPEQ LFHATPLLVI RDEAAQYVKA LQSLARRADE VYLALDADVE GEAIAYEAAI
AVRAVNRRAR LYRVKFNAVT PKDIRAAFQK PDTLNLKLVE KVFTRMQIDL TLGAVFTRAL
TLSVRNSLEK GQFLSYGPCQ TPVLGIVVNR ELERINFKPE KYYVIKAVVD IGGHRVEMGS
EVRYKTRAEA EAAASLIKRG VVKAAVYRPH KVEPPEPLET VELERRASRW LGINSKKTLD
VAEELYRAGY ISYPRTETTI YPPSLDLREV LQELAKGEHG EYARGLLKAG FRPTRGDSDD
GAHPPIYPTK GATKDELYRR FGKAAAYAWP IYDFVVRHFL ATLSPPAVVE KQKIVVSFGK
IELEAEGQRT LDEGYWRIYP WERQAEKPLP VVKPGEAAYA VKVSVVERET QPPPPMTESE
LLALMKKYGI GTDATMQDHI HTNVKRGYMR LQKGKCTPTP LGMALATALF QYVPELIEPT
VRAKIERALN SIVRDGVPPA KLAAEVKAEF AKYFEKLQQH RREIKEALEK ALNSSP
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