| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1111 |
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| Symbol | |
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| ID | 4910140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1043294 |
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| End bp | 1044628 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640124865 |
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| Product | elongation factor 1-alpha |
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| Protein accession | YP_001056002 |
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| Protein GI | 126459724 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5256] Translation elongation factor EF-1alpha (GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00483] translation elongation factor EF-1 alpha
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCTA TAGTACTGCC ACCAAAACCC ACGGCACTAC AGAAGCCGCA CATAAACCTA
GCAGTGGTAG GCCACGTGGA CAACGGCAAG TCTACGCTGG TCGGCCGCCT GCTCTATGAG
ACTGGGTACG TGGACGAGAA GGCGTTTAAG GAGATTGAGG AAATGGCTAA GAAGATGGGT
AAGGAGGACT TCGCATTTGC GTGGATTCTA GATAGATTCA AAGAGGAGAG AGAGCGCGGC
GTGACGATAG AGGCTACTCA CGTGGGCTTT GAGACGCAGA AGCTCTTCAT CACAATTATC
GACTTGCCGG GGCACAGGGA CTTCGTGAAG AACATGATCG TCGGCGCCAG CCAGGCCGAC
GCGGCCCTCT TCGTAATCTC GGCGAGGCCG GGCGAGTTTG AGACCGCGAT AGGCCCACAG
GGGCAGGGAA GAGAGCACTT GTTCTTGATA AGGACGCTGG GTATACAGCA GTTAGTTGTT
GCTGTGAACA AAATGGACGC TGTTAACTAC GATCAGAAGA GGTATGAGCA AGTGAAGGCT
GAGGTGTCTA AGCTCCTCAA GCTCCTCGGC TATGACCCCA GCAAGATCCA CTTTGTACCC
GTCAGCGCCA TTAAGGGCGA CAACGTAAGA ACGAAGTCTC CCAACACGCC TTGGTACCAG
GGGCCGACGC TTCTGGAAGT TCTCGACACC TTCCAGCCGC CTCCCAGGCC TACGGACAAG
CCGCTTAGAA TGCCTATACA GGACGTGTTC TCCATCACTG GCGCTGGGAC TGTGGTAGTG
GGCAGAGTGG AGACTGGGGT GCTTAAGGTG GGCGACAAGG TGGTCATAGT CCCGCCGGCC
AAGGTGGGCG ACGTCAGATC TATTGAGACT CACCACATGA AGCTTGAGCA GGCGCAGCCG
GGCGACAACG TTGGCGTAAA CGTGAGGGGC ATTAACAAGG AGGATGTGAA GCGCGGCGAC
GTGTTGGGCA AAGTTGACAA TATCCCAACG GTGGCTGAGG AGATCGTGGC CCGTATTGTA
GTTCTCTGGC ACCCCACGGC GATTGGGCCT GGCTATGCGC CAGTGATGCA CATACACACG
GCCACTGTGC CAGTTCAGAT AGTGGAGCTG GTGTCTAAGC TTGACCCACG TACTGGCCAG
GCCGTGGAGC AGAAGCCTCA GTTCATTAAG CAGGGCGACG TGGCCATTGT GAAAATCAAG
CCGCTTAAGC CTGTGGTGGC TGAGAAGTTC AGCGACTTCC CGCCGCTTGG CCGCTTCGCG
CTCCGCGACA TGGGTAGGAC AATTGCCGCT GGCCAAATAC TAGAGGTTAA GCCGGCGCAG
GTCCAGATTA AGTAA
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| Protein sequence | MPSIVLPPKP TALQKPHINL AVVGHVDNGK STLVGRLLYE TGYVDEKAFK EIEEMAKKMG
KEDFAFAWIL DRFKEERERG VTIEATHVGF ETQKLFITII DLPGHRDFVK NMIVGASQAD
AALFVISARP GEFETAIGPQ GQGREHLFLI RTLGIQQLVV AVNKMDAVNY DQKRYEQVKA
EVSKLLKLLG YDPSKIHFVP VSAIKGDNVR TKSPNTPWYQ GPTLLEVLDT FQPPPRPTDK
PLRMPIQDVF SITGAGTVVV GRVETGVLKV GDKVVIVPPA KVGDVRSIET HHMKLEQAQP
GDNVGVNVRG INKEDVKRGD VLGKVDNIPT VAEEIVARIV VLWHPTAIGP GYAPVMHIHT
ATVPVQIVEL VSKLDPRTGQ AVEQKPQFIK QGDVAIVKIK PLKPVVAEKF SDFPPLGRFA
LRDMGRTIAA GQILEVKPAQ VQIK
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