| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1104 |
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| Symbol | |
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| ID | 4909461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 1036761 |
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| End bp | 1037453 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640124858 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_001055995 |
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| Protein GI | 126459717 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGCGGC GGAGGAGGTT CAGCCAGCAC TTCCTCAAGA GCAGGGAGGT GGCTGAGTTC
ATAGTGGGCC TAGTGCCGCC GGGCCTAGAC GTGCTAGAGG TGGGGCCCGG CCGAGGCGCA
CTTACCATCC CCCTCGCCGA GAAGTCCCGC GTGGTATACG CCATAGAGAT CGACAGGGGG
CTCGCGGAGG AGCTCAGGCG GGCGGCTCCG CCCAACGTGG TGGTCATCGT GGGCGACGCG
CTCGAGGTGG AGTGGCCGCC CGCCCAGTAC TTCGTCTCCA ACGTCCCCTA CGAGATCACT
TCCCCCCTCT TGCTCAAGCT GGCCAGGCAC AGGCTCCCCG CCGTGGTCAC AGTCCAAAAG
GAGGTGGCAG ACCGCCTCGC CGCCGAGCCG GGCACCGAGG AGTACGGGAG GCTCACCGTG
GCGGTGCGTT GTCACTACGA CGTAGAAGTG GTGAGGGTCC TCCCTCCACA CGCGTTCTCT
CCCCCGCCGA AGGTGTACTC CGCCGTCGTG AGGCTGACGC CGAGGCCCCC CTGCATAGAG
GACTTCGAGG GCTTCCAGCG CTTCACCGCG GCGCTCTTCT CCGCGAGGCG TAAGACGCTG
CGCCGGCTCA AGCTCGCGGA CTCCGAGAAG AGGATCTTCC AGCTCTCCCT CGAGGAGATC
GTGGAGTTGT ACAAGAGGAC GAGGGGGCCT TAA
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| Protein sequence | MGRRRRFSQH FLKSREVAEF IVGLVPPGLD VLEVGPGRGA LTIPLAEKSR VVYAIEIDRG
LAEELRRAAP PNVVVIVGDA LEVEWPPAQY FVSNVPYEIT SPLLLKLARH RLPAVVTVQK
EVADRLAAEP GTEEYGRLTV AVRCHYDVEV VRVLPPHAFS PPPKVYSAVV RLTPRPPCIE
DFEGFQRFTA ALFSARRKTL RRLKLADSEK RIFQLSLEEI VELYKRTRGP
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