Gene Pcal_1091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_1091 
Symbol 
ID4910125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp1024619 
End bp1024921 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content54% 
IMG OID640124843 
Product30S ribosomal protein S26e 
Protein accessionYP_001055982 
Protein GI126459704 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG4830] Ribosomal protein S26 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATGC CTAAGAAGAG GAAGAACCGA GGCCGTAAGA AGGGGGATAA GGGCCGTGAG 
CCGTATGTGT ACTGCGACAA CTGCGGCAAG GTTGTGCCAA GGTCTAAGGC TATTAGGCTC
ACTGTGCCCT ACTCCCCGGT GCCTCCCGAC CTCGCCAGAG AGTTGGAGAA GCAGGGCGCA
ATAATATCGA GGTACCTCGT GACTAAGACG TATTGTATAA ACTGCGCCGT GTTCTTCGGC
ATTATAAAGG TGAGGCCTAG AGAGGAGAGG AAGAAGAGGG TTCCGCTTCA GCAGGTTATT
TGA
 
Protein sequence
MAMPKKRKNR GRKKGDKGRE PYVYCDNCGK VVPRSKAIRL TVPYSPVPPD LARELEKQGA 
IISRYLVTKT YCINCAVFFG IIKVRPREER KKRVPLQQVI