| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1006 |
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| Symbol | |
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| ID | 4908155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 949626 |
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| End bp | 950831 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640124756 |
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| Product | hypothetical protein |
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| Protein accession | YP_001055897 |
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| Protein GI | 126459619 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTAA GTGATTACAA AGTGTTGTTT ATGCTTTTTG AACTGTTGCG GCTGTCATGG
AAGGCTTTGT GGGAGCGTAG GGGGAGGACT ATAGGGGCCA TCGTGGGCGT CGTCATTGCG
TTTACTGCGC TTAGCTTTTC GCTTCTGTTG ACGCAAACGA TGAAGGAGGC CGTGGCTGAG
TTTTTTGAGA AAAACTTTGG CCTCAACATA GTCATGTTAG TCGGCTCGCT TTTCACCGAC
GCAGACGTGG CGTCCTTGTC CTCCATAGAG GGGGTAGAGG CGGTGGTCCC CATGGTGGCG
TACAGGGGCC GTGTCAGAGT GCCCGGCAGT GGGGAGTTCA TTGCGGCGAA CGTGTACGCC
ATAAACCCGG CAGATGTCCC CCGGGTTATA CCGCAAGCGG CGCTACACGA CGGTCAGCTC
TTTGTGGGAC AGGGCTTCGC CTTGGCGGGG TACTATATCG CATACGACAG ATCCACAGGT
GAGCAGAGGG TGGGCCCCGG CTCCATTATT TCGCTCGACT TAGAGAAGAA GGCTGTGAGC
CTGGTGGTGG CTGGGGTGCT GGCCGTGGGG AGCATAGGCT TCTTCAGCAC TGCCACTGGG
GTGGTTATTG ACTTAAGCGA GTATCGACGG CTCACAGGCT TTGAGAAGTA CAACGTGTTG
GTGGTGGTTG CTAGGGACTC CTCCCTTGTT GATGACATTA TCAGCGAGGT GAGGGCCAGG
TTTCCGACCG CCGAGATCCT ATCGCCCCAG GTTATACTCA AGTCGATCAA CGCCTTTTTG
ACAGGTTTTC AAGCGTTTCT CGGCCTAGTG GCTGGGGTCA GCACTGTTAT CACAGCGCTT
TGGCTGTACG ACACCATGAG CATAAGCGTC TTGCAGAGGA CTAGGGAGAT CGGCATTATG
AGGGCTGTGG GGTTCAAGAG GAGGCACATA ACCCTCATGT TCCTCGGCGA GGCGTTCATA
ATAGCCGCAA TAGGCGTGGC CATTGGCTCT GTACTCCTCG TGCCGCTGTC CGACATAGAC
CTGTCTACGT TATTTAACGC TGGGCCCGAT ATGTCATTTC TCCCACCAGG CACGAGGCTG
ATAATCGACC CGACCGCAGT AGCCGCAGCC GTCATGGTGG TAGTTGCTGT CAACCTCATT
GGCGCCTTGG CGCCGGCAAT ACGGGCAAGC AGAATAAGGC TAGTAGAGGC ACTGAAATAT
GAGTGA
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| Protein sequence | MNLSDYKVLF MLFELLRLSW KALWERRGRT IGAIVGVVIA FTALSFSLLL TQTMKEAVAE
FFEKNFGLNI VMLVGSLFTD ADVASLSSIE GVEAVVPMVA YRGRVRVPGS GEFIAANVYA
INPADVPRVI PQAALHDGQL FVGQGFALAG YYIAYDRSTG EQRVGPGSII SLDLEKKAVS
LVVAGVLAVG SIGFFSTATG VVIDLSEYRR LTGFEKYNVL VVVARDSSLV DDIISEVRAR
FPTAEILSPQ VILKSINAFL TGFQAFLGLV AGVSTVITAL WLYDTMSISV LQRTREIGIM
RAVGFKRRHI TLMFLGEAFI IAAIGVAIGS VLLVPLSDID LSTLFNAGPD MSFLPPGTRL
IIDPTAVAAA VMVVVAVNLI GALAPAIRAS RIRLVEALKY E
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