Gene Pcal_0982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0982 
Symbol 
ID4908601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand+ 
Start bp928494 
End bp929156 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content56% 
IMG OID640124732 
Productphosphoribosyltransferase 
Protein accessionYP_001055873 
Protein GI126459595 
COG category[R] General function prediction only 
COG ID[COG2236] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.417621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAAGG TGCCAGTTAA GGTGGTGTCC TTCGACGAAA TAGTAGAGTG GAGCAGGTTG 
TTGGCTGAAA AGATCAGGGG GAGTGGGTGG TCGCCAGACG TCATTGTGGC AATTGCCAGA 
GGCGGCTATG TGCCAGCCCG CTTGCTCTGT GATTGGCTGG GCGTAACCGA CTTGGTCAGT 
ATACAAATAG TGCACTGGCC CGTTGCAGCG CAGGTGGCCG AGAAGGCGTA TGTGAAATAT 
CCCGTAAACG TGGATCTCTC GGGCAAACGC GTACTTATAG TGGACGACAT AGTGGACACG 
GGGGACAGCG TGGAGCTGGC GAAGAGGAGC ATCGAGGGGT GTTGTAGGCC GGCTGAGGTG 
AAGACGGCGG CGCTACAGTT AATCACAAGC GTGGCCAAGT TTGTGCCCGA CTTCTACGCG 
GTGGAGGTGA AGGAGTGGGC CTGGTTTGCC TACCCGTGGA ACGCAGTGGA AGACGCCGTC 
GGCTTCATTA TGAAGATTGT TAGAGAGACT GGCAAGTCTG AGTGGTGTCT CGACGAGATG 
TTACAGGCAC ACTTGGAGTG GTACGGCCGG GAGTATGTGG AAAAGCGCTT TGGCCACATA 
CTCTACGCCT TGGACATGTT GGCGAGCAGA GGGGCTATAA GGCTAGCCAA GTGTAGGGCC 
TAG
 
Protein sequence
MPKVPVKVVS FDEIVEWSRL LAEKIRGSGW SPDVIVAIAR GGYVPARLLC DWLGVTDLVS 
IQIVHWPVAA QVAEKAYVKY PVNVDLSGKR VLIVDDIVDT GDSVELAKRS IEGCCRPAEV 
KTAALQLITS VAKFVPDFYA VEVKEWAWFA YPWNAVEDAV GFIMKIVRET GKSEWCLDEM 
LQAHLEWYGR EYVEKRFGHI LYALDMLASR GAIRLAKCRA