| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0976 |
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| Symbol | |
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| ID | 4909487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 922987 |
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| End bp | 924126 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640124725 |
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| Product | pullulanase |
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| Protein accession | YP_001055867 |
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| Protein GI | 126459589 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4945] Membrane-anchored protein predicted to be involved in regulation of amylopullulanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.853358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA AGTTGCCACT TCTCCTAGTG GTGCTGTCGG CTGTGTTGTT ATATGCCCAG
GGCGTATTTG TTGTACAATC GGCCACAGAC CCCACTGGCG ACTACAAAGG CCCAGGCTGG
TTCCTTCCGC CTCAAAACCC CGTGTTCAAG AACGGCACAG TGTTTGATCT CACAAGGTTC
GAAGTTTTGT ACAACGCCAC GGCAGACGCG CTGGTCTTTA GGCTGACTTT CGCCGACTTG
GGAGACAACC CGTGGGGCAC TGAGACCGGC TTCTCTGTAC AATATATACA GATATATATC
CACAGAGGGT TCCCGGGCAA CCCGTGGGGC ACTGTCTCTT GCACCATCTT GAGGCCCGAC
GACGGCGACG TGGCCGCCGG CAACGCGTTT TTCGACGAAG CCACTAGGTT CTTCTGCCCA
GACCCCGCCA ATTTGACACA GTTTAAGTAC ACCCCAGGCG TGAAGTTCTC AAACGACGCG
CCTTGGGACG TGGCCATATT CATAGGGCCT AAGTGGGGCA ATGAAACTGT CAACTACGTG
GCCGTGGCCG ACGTGACTGG GGGCACGATA TCCGTGGCTC CGTTGCAACG GGTATACGCC
AGTGGAAACA CCATAGTGGC CGTTGTCCCA AGAAGCGCCA TACCCCCCAC CACTAGGCTC
ATGAGCGACT TCCCACAGCC CAGCTGGCGC TACTACGTGT TAGTCACGTC GTACGACGGA
TATGGCCCCG GCCGCATTAG GCCCTTTGGA CCCATGGCGC AGGAGTGGGC CGTGGGCGTC
GGCGCAGCCA ACGCCTCCTC AGTGCTCGCT GGGACAGTAC CCAGAGTGTT AGACGTACTG
GGCCCCAACA CTCCGCTTGC CACATTTACA CGTAATTCCT CAGCAACGCT ACCCTCCACC
ACACTTGCTT GGGGCAACTT CCCGCTCGCA GTTACAACTA CCACAGTTAA CAGAATCCTG
CCAGTAACTG CAACCAAGAC CGCCACCTTG ACTATTACCG AGACTTCCTT TGTCACAAGA
ACTGTGACTC AGACACAGCA AGTTATTCAG CCCGTGGTGG ATCCGATGAG CTACGTGGTG
ATGGGGATAG GCGTTGTGGC AGGCCTTGTC GGCGCCATTG CAGCAGCCAG GCGGAAGTAG
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| Protein sequence | MSKKLPLLLV VLSAVLLYAQ GVFVVQSATD PTGDYKGPGW FLPPQNPVFK NGTVFDLTRF
EVLYNATADA LVFRLTFADL GDNPWGTETG FSVQYIQIYI HRGFPGNPWG TVSCTILRPD
DGDVAAGNAF FDEATRFFCP DPANLTQFKY TPGVKFSNDA PWDVAIFIGP KWGNETVNYV
AVADVTGGTI SVAPLQRVYA SGNTIVAVVP RSAIPPTTRL MSDFPQPSWR YYVLVTSYDG
YGPGRIRPFG PMAQEWAVGV GAANASSVLA GTVPRVLDVL GPNTPLATFT RNSSATLPST
TLAWGNFPLA VTTTTVNRIL PVTATKTATL TITETSFVTR TVTQTQQVIQ PVVDPMSYVV
MGIGVVAGLV GAIAAARRK
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