Gene Pcal_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0950 
Symbol 
ID4909697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp897834 
End bp898190 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content57% 
IMG OID640124698 
Productaconitase subunit 2 
Protein accessionYP_001055841 
Protein GI126459563 
COG category[S] Function unknown 
COG ID[COG1786] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCGG TCGTTAGGGC CAGTGGTGTA AAGCGAGTGG TTAGGGCCGA GGTTGTCAAA 
ATAACGCAGC CGGTCTCTCT CCTAGGCGAT TTTGACCCAG AGACTGGCAG ACTCCTCGGC
GTCGATGTAG TTGGAAAAAT TGTGGCGCTG CCGTACGTGA AGGGCTCCAC TGTGGGGCCC
TACCTCATGT GGAGTGCCTC AAGGCGGGGC AAGATTCCCC TGGCCGTGGT GGCAGAGAAG
CCGGACCTCA TGTTGGTGAC CGCTTGCGTT CTCGCAAACG TGCCGCTTTT CCAAGGCGTC
ATGGAAGAAG GCTGTGTAGA ATTGGACCTA GAAAGTGGGG AGTATGTCAA GTGCTGA
 
Protein sequence
MKPVVRASGV KRVVRAEVVK ITQPVSLLGD FDPETGRLLG VDVVGKIVAL PYVKGSTVGP 
YLMWSASRRG KIPLAVVAEK PDLMLVTACV LANVPLFQGV MEEGCVELDL ESGEYVKC