| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0942 |
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| Symbol | |
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| ID | 4910020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 889810 |
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| End bp | 891390 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640124690 |
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| Product | DNA topoisomerase VI subunit B |
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| Protein accession | YP_001055833 |
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| Protein GI | 126459555 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1389] DNA topoisomerase VI, subunit B |
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| TIGRFAM ID | [TIGR01052] DNA topoisomerase VI, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCTGT ACACCTATGA GGCACTACCT GTAGCTGAGT GGTTTAGGCG TAACAAAGAG
CTGGCAGGCT TTCACAACCC GACTAGGGCG CTCTATCAGA CTATCAGAGA GCTTACTGAG
AACTCGCTAG ACGCCACCGA GACCTACGGC ATACTTCCAA CGGTGTATCT GCGGGTGAAG
ATTGAGGATG AGCAGAAGAG CTGGGTGTCC GTCTACGCCG AGGATAACGG GATAGGCATA
CCTGGGGATG AGATTCCAAA CGTCTTCGGC CGCGTCTTCT ACAGTAGCAA GTATAGGATT
AAGCAACATA GGGGCGTGTT TGGGCTTGGC CTTAAGATGG TGGTGTTGTA TGCCCAAAGC
ACTACGAATA AGCCTGTCTA TGTCAGATCG GCTACGGTGA AGTCTGATAA GATATACGAG
TATCAGATAA TGATAGACAC GAATAAGAAT AGTCCAATAA TCCTGGATAG GAGGGAGTAT
CCGAATAGGC AGAAGTGGCA CGGAACTGCG GTTAAGGTGT ACCTCGAGGG CAATTGGCTG
GGGGCGAAGA AGAGGATTGA GGAGTACATT AAGAGGACGG CCATAATTGC CCCCTACGCG
GAGATAGTGT TCAAGGGGCC TGACTTAGAG CTTTGGCTTA AGAGGAGAAC GACGAAGCTT
CCCCCGGCCC CCAAGGAGGG CCTTCCCCAT CCGAAAAGCG TCGATGTGGA TACCTTGAAG
CAGATGATTC AAGCCAGCAG GGGGATGACC CTCCTTGAGT TTCTAACGGA GAACTTCGAC
GCCGTGGGGG AGGGCACTGC AAAAGCCTTC TTGGAGTGGG CTGGGTTTAA CCCAAACGCG
AAGGTGGCTG GGCTGACGCC GGAGGAGCTC GTGAGACTTG TGGAAAAGAT GAAGCAGTAC
GAGGGCTGGA GGAGGCCTCG CGCAGATTGG CTGTCTCCCG TGGGCGCAGA GCTGTTGGAG
ATAGGCGCCA AGGCGATCTT AGGCGCAGAG GCCGTCTTCG CGGTTACTAG GAGGCCTGAG
TCCTACGGCG GCCACCCCTT CATTGTCGAG GCGGCGGTTG CTTGGGGCGG CCAAATACCG
CCTTCGGATA AGCCGATCTT GTTGAGGTAT GCCAACAAGA TTCCCCTCCT CTACGACGAA
GGCGCAGACG TGGCTAGGAA AGTGGTGGAC GAATTCCACT GGGATAATTA CAAGGTTAAA
TTCCCGGCGC CTCTCGCAGT TATAATACAC GTTTGTTCTA CAAAGATTCC ATACGCCTCG
GCTGGTAAGG AGGCAATTGC GGAGGTCCCG GAGATTGAGA AAGAGATGCG TCTAGCGCTG
AGGGACGCCG CAAAGAAGCT TAGGTTGTAC TTGTCGAGGA AGGAGAGGGA GCAGGAGCTC
TTAAACAAAT ACATCTCGCT CGCCAAGTAC GTGGACGAGG TGGCGCACAA TTTCTCCATT
ATAACGGGCG TAGATAAGGG GCGCCTCGTC GACAGTTTGT ATAAGCTGAT CGAGAAGAAG
CTTGGCGTGA CGGTAGAGGA CGTGATTAAG CACGCCACTG CTGTGACTGC TCAAGCGGAG
GAGTTGGCCG CCCCACAGTA G
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| Protein sequence | MSLYTYEALP VAEWFRRNKE LAGFHNPTRA LYQTIRELTE NSLDATETYG ILPTVYLRVK
IEDEQKSWVS VYAEDNGIGI PGDEIPNVFG RVFYSSKYRI KQHRGVFGLG LKMVVLYAQS
TTNKPVYVRS ATVKSDKIYE YQIMIDTNKN SPIILDRREY PNRQKWHGTA VKVYLEGNWL
GAKKRIEEYI KRTAIIAPYA EIVFKGPDLE LWLKRRTTKL PPAPKEGLPH PKSVDVDTLK
QMIQASRGMT LLEFLTENFD AVGEGTAKAF LEWAGFNPNA KVAGLTPEEL VRLVEKMKQY
EGWRRPRADW LSPVGAELLE IGAKAILGAE AVFAVTRRPE SYGGHPFIVE AAVAWGGQIP
PSDKPILLRY ANKIPLLYDE GADVARKVVD EFHWDNYKVK FPAPLAVIIH VCSTKIPYAS
AGKEAIAEVP EIEKEMRLAL RDAAKKLRLY LSRKEREQEL LNKYISLAKY VDEVAHNFSI
ITGVDKGRLV DSLYKLIEKK LGVTVEDVIK HATAVTAQAE ELAAPQ
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