| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0915 |
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| Symbol | |
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| ID | 4908115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 871186 |
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| End bp | 872001 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640124663 |
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| Product | shikimate kinase |
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| Protein accession | YP_001055806 |
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| Protein GI | 126459528 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1685] Archaeal shikimate kinase |
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| TIGRFAM ID | [TIGR01920] shikimate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTGTG CGAGGGCCTG CGCGTGGGGC GGGGGGACTA TAATTAACGC CATTGCCACA
GGTCTCGGCG CCGCTTTCCC CATCTCTATG AGGGCGACGG CGGAGGTCTG TGAGGCGGAG
CGCGACTCCG TCTCCACATA TGCCGACGTG GACATGGGGC CTGTCTTGAG AGCCGTGGCC
CTTGTGAGAG AGAAGCTGGG CTTGGGGCCT CTCTCTGTCA GGATAGAGGG CGATTTGCCC
ACCGCGGGGG GGCTTAAGTC GAGTAGCGCC ACGTTAAACG CCGTCATTAG AGCCGCGGCG
GAGCTCGCGG GGGTTAAACT CGACTTATTC GACGCGGCGA GGCTGAACGC GCAGATAAGC
AGAGAGGTGG GGATAAGCGT GACGGGGGCC TTTGACGACG CCGTGGCCAG CGCCGTCGGC
AGAGCGTATC TCACCGACAA CTTCAAGCTA GTGGTGATTA GGGAGTTGGA CGTGTCGGGG
AGGGCCGTGG TGTTGATACC GCCGTGGGAG AAGCGAAGGC ACAAGCTGGA GGAGATGGGG
GCCTTGGCGC CCGTCGTCAG AGTCGCTGTG TCGCACGCGG GGCTTGGCAT GTGGAAGGAG
GCCATGCTGA TAAACGCGGT GGCCTACGGC TACGCCCTCG GCTACCCCCC AGACCCCCTC
CTCGACGCGC TGAAGCTGGG GGCCGTTGGC GGAGTGTCGG GGACGGGGCC CTCCCACGTC
TTCGTCGCCG AGGACCCAGA GCGGCTTGCC CAAGCCTTGG CCAAGTATGG GAAAACCTAC
GTGGTGGATA TCCCGAGAGG CCCTTGCGAG GCGTAG
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| Protein sequence | MKCARACAWG GGTIINAIAT GLGAAFPISM RATAEVCEAE RDSVSTYADV DMGPVLRAVA
LVREKLGLGP LSVRIEGDLP TAGGLKSSSA TLNAVIRAAA ELAGVKLDLF DAARLNAQIS
REVGISVTGA FDDAVASAVG RAYLTDNFKL VVIRELDVSG RAVVLIPPWE KRRHKLEEMG
ALAPVVRVAV SHAGLGMWKE AMLINAVAYG YALGYPPDPL LDALKLGAVG GVSGTGPSHV
FVAEDPERLA QALAKYGKTY VVDIPRGPCE A
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