| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0890 |
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| Symbol | |
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| ID | 4908505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 847659 |
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| End bp | 848420 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640124639 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_001055782 |
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| Protein GI | 126459504 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAGTGG GCATTGTGGG AGGCGGCGCC ATGGGGCAGT GGCTTAGGCG CGAGATAGGC
AAGGCGCACG ACGTGTTGAT ATACGACGTG GACAAGTCGA AGAGCGACGT GGAAAGCCTC
GCGGCGCTTG TAGAGTGGTC TGATGTGGTG CTGGTGGCGG TGCCCTTTTG GGACACCGCG
AAGGTCCTAG ACGCCATTGC GCCCACGGCC TCTGGGCGGC TTGTGATGGA CATAGCGACC
TTTAAGGAGG GGCTGGCAGA GGTGTACAGA CGGTTTCCCC CCGACGCAGA GGTGGCCACG
GTCCACCCCC TGTTTGGGCC GGGCGCCTCC GGCATAAGAG GGCAGAGGGT GTTGGTGATG
GAGGTGCCGG GGAGGAGCGG GGCTCAGCGC GCCTTTGAGT TCTGGCGGAG CCTTGGCGCA
GAAGTGGAGT GGGGCGACTT GTCTAAACAC GACTACTATG TCTCAAGGAC GATCGCGTTG
AGCTACGCGG TGGGGCTTGC ACTCGCAAGA CTGTACTCCG AGGCAGGCGA AGAGATCGTC
AAATATGGAG GCACGTCCTT CAAATACCTC GCCACCTACG CCTTCTCGCT TCTCAGAGAC
AAAAACGCGC AACGGTACGC GGAGAGGGCC CCGCTGGACG AGTTCATGAA AGCTCTGCAG
GAGGGCGGCG ACCTTGGTAG ATCGTTGATT GACCCAGACG TGGCCTACGA GAGGTTTTAC
AAGGCGCTGG AGTGTATAGG CGATATCTTT AAAAGGGAGT AG
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| Protein sequence | MRVGIVGGGA MGQWLRREIG KAHDVLIYDV DKSKSDVESL AALVEWSDVV LVAVPFWDTA
KVLDAIAPTA SGRLVMDIAT FKEGLAEVYR RFPPDAEVAT VHPLFGPGAS GIRGQRVLVM
EVPGRSGAQR AFEFWRSLGA EVEWGDLSKH DYYVSRTIAL SYAVGLALAR LYSEAGEEIV
KYGGTSFKYL ATYAFSLLRD KNAQRYAERA PLDEFMKALQ EGGDLGRSLI DPDVAYERFY
KALECIGDIF KRE
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