| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0885 |
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| Symbol | |
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| ID | 4908134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 842387 |
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| End bp | 843325 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640124634 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001055777 |
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| Protein GI | 126459499 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTG TTGTAACAGG CGGCGCTGGG TTCATTGGTA GCCACCTCGT GGACAAGCTC
GTGGAGCTTG GGTACGAGGT CGTCGTCGTG GACAACCTCT CGAGCGGCAG ACGCGAGTTT
GTCAACCCCA GCGCAGAGCT CCACGTCAGA GACCTCAAGG ACTACTCCTG GGGCGCGGGG
ATCAAAGGCG ACGTAGTTTT CCACTTCGCC GCAAACCCCG AAGTCCGCCT ATCCACCACA
GAGCCCATCG TTCACTTCAA CGAGAACGTG GTAGCCACTT TCAACGTGTT AGAGTGGGCG
AGGCAGACGG GGGTGAGGAC TGTGGTATTT GCCTCATCCT CCACCGTGTA CGGCGACGCC
GACGTCATTC CAACGCCGGA GGAAGAGCCG TACAAGCCGA TATCGGTCTA CGGCGCGGCA
AAGGCGGCGG GCGAGGTCAT GTGCGCCACC TACGCCAGGC TATTCGGCGT CCGGTGCCTC
GCGGTTAGGT ACGCGAATGT GGTAGGGCCC CGGCTTAGGC ACGGCGTAAT ATACGACTTT
ATAATGAAGC TCAGGAGAAA CCCCAACGTC CTCGAGGTGC TGGGAGACGG GACGCAGAGA
AAGAGCTACC TCTACGTCAG AGACGCCGTA GAGGCCACGT TGGCCGCGTG GAAGAAGTTC
GAGGAGATGG ATGCCCCCTT CCTAGCCCTC AACGTGGGCA ACGTAGACGC GGTGAGGGTG
TTAGACATTG CGCAGATAGT GGCAGAGGTC TTGGGGCTAA GGCCCGAGAT TAGGCTAGTC
CCCTCTACCC CAGACGGGAG GGGGTGGCCC GGAGACGTGA AGTACATGAC ACTCGCAGTG
ACAAAGCTCA TGAAGCTGAC GGGGTGGAGG CCCACTATGA CAAGCGCCGA GGCCGTTAAA
AAGACGGCGG AGGACCTGGC AAAAGAGCTA TGGGGCTAG
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| Protein sequence | MRIVVTGGAG FIGSHLVDKL VELGYEVVVV DNLSSGRREF VNPSAELHVR DLKDYSWGAG
IKGDVVFHFA ANPEVRLSTT EPIVHFNENV VATFNVLEWA RQTGVRTVVF ASSSTVYGDA
DVIPTPEEEP YKPISVYGAA KAAGEVMCAT YARLFGVRCL AVRYANVVGP RLRHGVIYDF
IMKLRRNPNV LEVLGDGTQR KSYLYVRDAV EATLAAWKKF EEMDAPFLAL NVGNVDAVRV
LDIAQIVAEV LGLRPEIRLV PSTPDGRGWP GDVKYMTLAV TKLMKLTGWR PTMTSAEAVK
KTAEDLAKEL WG
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