| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0879 |
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| Symbol | |
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| ID | 4908193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 836979 |
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| End bp | 838085 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640124628 |
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| Product | chorismate synthase |
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| Protein accession | YP_001055771 |
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| Protein GI | 126459493 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0082] Chorismate synthase |
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| TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCT TCGGCCGGGA GTTCCGGATA ACCACCTTCG GCGAAAGCCA CGGCAAAGCA
GTAGGCGTAG TAGTCGACGG AGTCCCCGCC GGCCTGCCCT TGTCCGAGGA AGACGTGAAG
CGGGAGCTTG AGAGGCGCAT GTTTTGCCAC ATCCCTGTCC TAAACCCGAG GTGTGAGCCA
GAGGAGTTTG AAATACTCTC GGGAGTCAAA GAGGGGCGCA CCCAGGGGAC TCCCATAGCC
ATAGTCATTT GGAACAGGAA GGTCATCTCC AGCTACTACG AGGAGCTTTG GCTCAAGCCC
AGGCCAGGCC ACGCGGACTT GGCATACTAC CTCAAATACG GCATCAACTA CGACCACAGA
GGCGGGGGGA GGGCCTCTGG GCGCACCACG GCGGCCATAG TGGCCGCGGG GGCGGTGGCA
AAGGCCGTGC TTAGACACGT GGGGGTCGAG GTGCTGGGCC ACGTGGTGGA GCTCGGCGGT
GTGGAGATAT CGGCCACGTA CACCGTGGAC GACGTGAGGA AGAGCTGGGA GAAGCCCCTC
CCCGTGGTAG ACGACGCGGC CCTGGAGAAG ATGGTCGAGA AGATCAGGGA GGCTGTGCTG
AGGGGAGACA GCATAGGAGG CGGGGTAGAG GTGTGGGCCT TGGGAGTTCC GCCGGGGCTC
GGCGAGCCCC ACTTCGGCAA AATAAAGGCC GACTTGGCCA AGGCCGCATT CTCCATACCC
GGCGTAGTGG CGTTTGAGTG GGGCGCCGGG AGGGCCTTGG CCAAGATGTT TGGCTCAGAG
GCCAACGACC CCATCACCGT CGTCAACGGG AGACCGGCGC TGGCCACCAA CAGAGCCGGG
GGCCTTCTGG GCGGCATAAC TGTGGGCGCT CCGCTGTACT TCAGGGCGTG GTTTAAGCCG
ACCCCCTCCG TGCGCAAGCC GCAGCAGACC GTCGACTTGG GCAAAATGGA GCCCACCACG
CTGGAGTTCA AAGGCAGATA CGACGTCACC ATTGTGCCAA AGGCCCTAGT GGCGCTGGAG
GCCATAACCG CCGTGGTGCT GGCAGACCAC GTCCTGAGAG CCGGCATAAT ACGCAGAGAC
AGGCCGATAA GCGGCTCGCT GGTCTAA
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| Protein sequence | MNTFGREFRI TTFGESHGKA VGVVVDGVPA GLPLSEEDVK RELERRMFCH IPVLNPRCEP
EEFEILSGVK EGRTQGTPIA IVIWNRKVIS SYYEELWLKP RPGHADLAYY LKYGINYDHR
GGGRASGRTT AAIVAAGAVA KAVLRHVGVE VLGHVVELGG VEISATYTVD DVRKSWEKPL
PVVDDAALEK MVEKIREAVL RGDSIGGGVE VWALGVPPGL GEPHFGKIKA DLAKAAFSIP
GVVAFEWGAG RALAKMFGSE ANDPITVVNG RPALATNRAG GLLGGITVGA PLYFRAWFKP
TPSVRKPQQT VDLGKMEPTT LEFKGRYDVT IVPKALVALE AITAVVLADH VLRAGIIRRD
RPISGSLV
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