| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0873 |
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| Symbol | |
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| ID | 4908312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 832696 |
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| End bp | 833310 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640124622 |
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| Product | haloacid dehalogenase superfamily protein |
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| Protein accession | YP_001055765 |
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| Protein GI | 126459487 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2178] Predicted RNA-binding protein of the translin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATAAGC CGCCGCGTGT CTTTATAAAC ATGCTCTCAC TGGCCGTTGT GATTGACATC
AGAAACCTCT ACGACGACCT AAGGGCCTAC GAGCGGGCAA AAGATGAAGT AGTCCAAACC
TCTATCAAGG TCTCCCGCCT CTCGAAGGCC GTGGTGTACT CAGCCATTAG GAAGGACTTC
GCCGCGGCTG AGAGGGCGCT CAAGGAGATG AACGACGTGG TGGCCCACTT GAGGAAGTTG
ATTGAGCAGT GGCCCATGTT CTATGGAAGC GCCACCACGG GTCTGCAGGA GTATGTAGAG
GCCACGGCCC TCTACAGCTT GTTGAAGGAG GGGCGTCTCC CGACTAAGGA GGAGCTGGGG
GTAGATGTCT ACACGTACCT CATGGGGATA GCCGACGTGG CAGGCGAGCT GGGGCGCACG
GCAACGGAGG AGCTACTCCA GAAGAATGTA GAAGCGGCGA GCAGGATTAA AGAGGCGGTT
GAGAAGCTCT ACCTAGACCT CTTGGCCCTT GAGCCGAGGG ATTACGAGCT TAGGAAGAAG
GTGGACTACG TGGGGTCGCA GGCCAACTGG ATCTCTGAGA AGCTGTTCTA CGCCACTACG
TGCCGCCATG AGTAA
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| Protein sequence | MHKPPRVFIN MLSLAVVIDI RNLYDDLRAY ERAKDEVVQT SIKVSRLSKA VVYSAIRKDF
AAAERALKEM NDVVAHLRKL IEQWPMFYGS ATTGLQEYVE ATALYSLLKE GRLPTKEELG
VDVYTYLMGI ADVAGELGRT ATEELLQKNV EAASRIKEAV EKLYLDLLAL EPRDYELRKK
VDYVGSQANW ISEKLFYATT CRHE
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