| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0845 |
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| Symbol | |
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| ID | 4908783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 806126 |
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| End bp | 806851 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640124594 |
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| Product | ABC transporter related |
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| Protein accession | YP_001055737 |
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| Protein GI | 126459459 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.791281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCTGA GGCTTGAAAA CGTGGTTAAG AAATTCGGCG GGCTGAGAGC GGTGGATGGA
GTGTCGCTAG AGGTGGGCAA GGGGGAGTTT CTGGCAGTGG TTGGGCCCAA CGGGTCTGGA
AAGACCACAC TTCTCAACAT AATAAGCGGC GTATATAGGC CAGACGAGGG CAGAGTCTAT
TTTGAGGGCA GAGATGTCAC AGATCTGCCG CCTTACAAGA GGGCGAGGTT GGGCATGGCT
AGGGCCTTCC AAGTCCCCCG CCCGTTTCCA GAGCTCTCTG TGCTTGAAAA TGTGGTGGTG
GGCGCGGTGT TTAACGGAGG GCTAGACTTG CACAAGGCTA GGGAGGCGGC TGAGGAGGCG
TTGTCCTACG TGGGTCTGGC CTCTAAGAAG GACCAGCTGG CGGGGAAGTT GACGTTTAAC
GAGCTTAGGC TCTTGGAGTT GGCCAGGGCG CTTGCCAGCA ACCCCAAGCT CCTCCTCTTA
GACGAAGTGA TGGCCGGCTT AACGCCGACG GAGATAGACA GATTTGTCGA GCTTCTCCGC
CGCCTCTCCG AGGAGCGGGG CATATCTGCC ATCTCGCTTG TGGAACACAG GATGAGGGCC
GTTGTTAGAC TTGCGCATAG GGTAGTCGTA ATGCACCAGG GGAAGATAAT AGCGGAGGGC
CCCCCTGAGA AGGCGTTAAA CGATCCCAGA GTGGTCGAGG TCTACCTGGG GAGGCCATGG
CGTTAG
|
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| Protein sequence | MILRLENVVK KFGGLRAVDG VSLEVGKGEF LAVVGPNGSG KTTLLNIISG VYRPDEGRVY
FEGRDVTDLP PYKRARLGMA RAFQVPRPFP ELSVLENVVV GAVFNGGLDL HKAREAAEEA
LSYVGLASKK DQLAGKLTFN ELRLLELARA LASNPKLLLL DEVMAGLTPT EIDRFVELLR
RLSEERGISA ISLVEHRMRA VVRLAHRVVV MHQGKIIAEG PPEKALNDPR VVEVYLGRPW
R
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