| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0843 |
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| Symbol | |
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| ID | 4908809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 804460 |
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| End bp | 805434 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640124592 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001055735 |
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| Protein GI | 126459457 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATA GGATAATTGG CGAAGTAATT ATAAAACTGT TTTTTATAAC CGTTCTCTCA
TTCCTCATAT ACTACACAGT TAAGGAAGTC TTGCCGCTGT TCCACATAGC CATACCCCCA
GAGTATATAG ACTTCGTCAG GGGCTTGATC GTAGCCGCAG CCGGCATCAT CGCAGTAAAC
GTCGTAGGCA ACGCGGTCAT ACTATACTTA AAGCCCACCA TACGCGAGAG GGCATACGCA
GTGGGAAACA CGGTCAAGGT AGTGGGCTTC CTATTCGTGA TAATACTCGC CCTCGCCACG
TCCAAGTTCG GAGTAGAATT CGCGGCGCTC GGAGGCACGG TGACGGGTCT CGTGCTCGGC
CTCGCTCTCC AGCCAGTGCT CGGCAACCTA TTCGCCGGAC TGTTGATCTT GGCAACGCGT
TTTGTCACAG TGGGCGACGT GGTTAGAATC ACTACGTCGC AACTGCCATA TCATTTGGCA
ACTCTCCCAG CCTATAAGTA CTTCTCCCCC GACTACGTTG TGCCAGGCTT CAAGGGCAGA
GTAGTGGAAA TAGGGCTCTT TTACACCACC CTCCTCTTGG ACACTGGCTA TGAGATACGG
GTGCCTAACT CCGTCTTGTT AAACGCGGGC GTAGTGGACT ACACGCCCGC GTGGAGCGAG
AGCCAGATAG TGCTGGTGAG AGTGGAGCTC CCCCTCTCTG TCATCGATTT AGACAAGGCT
GCGGACGAGA TTAGAGAAGA GCTCAAGGAC TTCGACGTAG TCGCTGTGGA CTTCACAGAG
CAAAGCGACA AGGATTTTGT AATAGTCAGA GTAAAAATCA GAGTGCCGCT CGGCAGAGAC
TGGCGGCCTG TCAAAAGCGA GGCCCTGAGA AGAATTTTGA AATACCGGGA GAAAAAGATC
AGGGAGAATA TGTACAAGTA CCTGTGCTTG ACTAGGGGCG TTGCGTGCGA CAGATTTCTA
CAGCAGACTG GCTAG
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| Protein sequence | MKYRIIGEVI IKLFFITVLS FLIYYTVKEV LPLFHIAIPP EYIDFVRGLI VAAAGIIAVN
VVGNAVILYL KPTIRERAYA VGNTVKVVGF LFVIILALAT SKFGVEFAAL GGTVTGLVLG
LALQPVLGNL FAGLLILATR FVTVGDVVRI TTSQLPYHLA TLPAYKYFSP DYVVPGFKGR
VVEIGLFYTT LLLDTGYEIR VPNSVLLNAG VVDYTPAWSE SQIVLVRVEL PLSVIDLDKA
ADEIREELKD FDVVAVDFTE QSDKDFVIVR VKIRVPLGRD WRPVKSEALR RILKYREKKI
RENMYKYLCL TRGVACDRFL QQTG
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