| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0836 |
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| Symbol | |
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| ID | 4908888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 795458 |
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| End bp | 796027 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640124585 |
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| Product | hypothetical protein |
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| Protein accession | YP_001055728 |
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| Protein GI | 126459450 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGGGCG GCAAACCTAT TGGGGAAAAC GTCGTCGCGG CTGTGACTAA GACTCTTGAC
AAGCTGTATA AAGAGCCGTT GGCGCAACTG GAGGCTTTGA TAAATGCCAC TGGACTGCCC
GTGTACAAAG ATCCAAAAAC AGGCGCGTTG CTGTGGGTGG ACGTCCGCGA GTTGCGTCTA
AGGTTTACAC TCTCTGTGAA CAAGATCGCC AAATTTGTCG AGGGGCTGGC GGAGGGGAAG
CTGTTCTACA CACAGTGTAA GAGGTGCGGC GCTAAATACT TCCCGCCGCA GGCGGACTGC
CCCAAGTGCA AATCCTCTGA CATGGAGTGG CGCGAAGTGA CTCCAGAGGG CGAGTTGTTG
ACATGGACTG TGATAAATGT AAAGCCAGCT AGCTTCAGCT ATCACGGGGA CTACGTTGTG
GGCATAGTTA GAATGGCTGA CGGGTTTAAC ATAACTGCGT GGGTTGAGGC AGACCCCAAG
ACGCTGAGGC CAGGGATGAA AATGAGGCTT GTAGTGGGGA GAAGGCCCGG CGAGAATTAC
ATAACTTATT GGTTTAGGCC GCAAATTTAA
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| Protein sequence | MEGGKPIGEN VVAAVTKTLD KLYKEPLAQL EALINATGLP VYKDPKTGAL LWVDVRELRL
RFTLSVNKIA KFVEGLAEGK LFYTQCKRCG AKYFPPQADC PKCKSSDMEW REVTPEGELL
TWTVINVKPA SFSYHGDYVV GIVRMADGFN ITAWVEADPK TLRPGMKMRL VVGRRPGENY
ITYWFRPQI
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