| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0827 |
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| Symbol | |
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| ID | 4909142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 786540 |
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| End bp | 787661 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640124576 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001055719 |
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| Protein GI | 126459441 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCAAG TCGTAGGTCT CGTCGTATAT CTCCTCGGAG CGGCCTTGGT GGCAGCCACG
GGAAGGAATT GGCAGAGCTA CCTCTTGACG ACAGCCGTGG ACCTGGCCAT ATACCTGGCC
ATAACCCTCA CGGTGAACTT GGAAGCGGGC ATCGCGGGAA TTCCAAACTT CGGCAGAGTG
CTCACAGTTG CCCTTGGGGC CTACGTGGCA GGCGGAGTTG TGGGCCGACT CGCAGTGCTT
ATTACTGGGC AGAGCTTGGA CTACGTGGCG GACAACCCCG CGGCAGTCTC CGCCCTCTCC
CGCCTGCTTA GCCCAGGCCA AGCCGCAGGC CTTTTGGCCA TCGCCTTTCT CTTGGCCGCC
GCGTTGGGAG CCGCGGTGGG GTACCTCACC TCTCTGCCGG CGAGGAGGCC GTCGGCGGAC
TACCTTGCCA TAACTCTCTT GGCCTTCGGC GACGTGGCCT ACTACGTGGG GCTGAACTAT
GAACCTCTCG TTGGCGGCAC TCTAGGTGTG GCGGCGCCTC CCCTCTATGA GAAGCTCTTC
GGAGGCGGCG CGGCCAGGGC CGTCGGCGCA GCCGCAATCT CCCTCGCCAT GGCGATGTTG
ATATATGCGC TTGTGGAGAA GATTGGGAAC TCACCATTTG GGAGGGCTTT GAGAGTACAC
AGAGAGGACC CCGAGCTGTT GTCAGTTCTG GGAAGAGACC CGGCGGAGCT GAGGGGCTGG
ACAATGGCCG TGGGCGGGGC CCTCTCCGCC GTGGCCGGAG TCTTGTATGC GTACTACGTC
GGTGCGGTCC ACCCCAGAGG GTTTGAGAGA GTCACCTTCA CCTTTTACCC ATGGCTAATC
ATGATACTGG GAGGCATGGG CAACAACCTA GGCGTGGCAA ACGGCGTCCT CATATTTGTC
ACCATATACC GCCTCCTCGA CGTATATAAG TACGAGATAG GCGCCGTCGT GGGCTTCGAT
CCCGTGTGGC TTGGCTACAT GCTCTTCGGC GCTCTGGCCC TCGCCATAAT AATTGCCGCG
CCCAGAGGCA TTGTCCCAGA GGAGGCCAAG CCTCTAACAA AACCCTCAGT GCAACACGGC
AGTGGAGCTA TTTCAGGTAG TAAAGGCGAC GCCGGGGGTT AA
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| Protein sequence | MRQVVGLVVY LLGAALVAAT GRNWQSYLLT TAVDLAIYLA ITLTVNLEAG IAGIPNFGRV
LTVALGAYVA GGVVGRLAVL ITGQSLDYVA DNPAAVSALS RLLSPGQAAG LLAIAFLLAA
ALGAAVGYLT SLPARRPSAD YLAITLLAFG DVAYYVGLNY EPLVGGTLGV AAPPLYEKLF
GGGAARAVGA AAISLAMAML IYALVEKIGN SPFGRALRVH REDPELLSVL GRDPAELRGW
TMAVGGALSA VAGVLYAYYV GAVHPRGFER VTFTFYPWLI MILGGMGNNL GVANGVLIFV
TIYRLLDVYK YEIGAVVGFD PVWLGYMLFG ALALAIIIAA PRGIVPEEAK PLTKPSVQHG
SGAISGSKGD AGG
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