| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0785 |
|---|
| Symbol | |
|---|
| ID | 4909541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 753053 |
|---|
| End bp | 754102 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640124534 |
|---|
| Product | phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein |
|---|
| Protein accession | YP_001055677 |
|---|
| Protein GI | 126459399 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTAG TTGTCCTTCT CACACTGGCG GCCTTCCTTG TACTCGCGGT TGGCCCCATA
AGGCTGGAAG TCCAAAGCGT GCTCGTATCG CCAGTCAACA CCACGTTGAT TGTGGACTAC
GTGAAAGCGG CTAAAAAAGC CGTCTACATG GAGGTGTATG TCTTCACGTA TAAGCCCTTG
GCAGACGCCC TCGCCTCCGC GGCCAAGAGG GGTGTTGACG TAGTCGTCGT ATTGTCGGCC
CGAGTTTACG GCGGAGTGCC ACAGTCGGCA AAGGAGATAG CCAGCTACCT AGAGGCCAAC
GGGGTGAAGG TGAAGTGGAA CAGCGACTTC CCCAATGTAC ATACAAAGCT CTACGTAATT
GACAACGAGA CTGTGATCAT TGGCAACATT AACCCCACTG CGTCCGGTTT TACAAAGAAC
AAGGGCATTA TGCTCGTGAT AAAAAACGCC ACATTGGCGC GTCAATTGGC CACAATTGTC
TTAAACGACT ACCGCGGCGT CTACCCACGG TACAATTACC CAGGCGTCTT AGTCTCGCCG
ATAAACTCCC AAGACGGCCT CCTGTGGATT CTCTCACAGC CCGGCGTCAG ATACATAGCC
ATGGAACAGA TCTACGTCGA CTCCGGCCTC GTCCCCTACA TAGTCAACGG GCCTTACTAC
GCGGTCGTGG CTAGGACAGA CGCCGACATA AACACCGCCG TAGATGAAGA CCTCGTGGCT
AAGATAATCG TGGTGGGGAA CTACGTGTAT GTGGGCTCTA TAAACATCGG CTACTACTCC
ATCCAGAGGA ACCGCGAGGT AGGGCTACTT ATAGAAAACC CGGGGCTGGC CCAGAGACTA
AAAACGCTGG TCATGAAGTG GTACCAGGAG GCTGGGGGCA AGGTAGAAAC GACGACAGAG
GCCTCGACCG CCACAGCGCC TCCCTCTACG TCTACTACTC CTAAGGCGCA AAACGCCGGG
AGGAGCTACT CGCTGGACGT ATTGATATGG CTGGCGATAA TAATAATCGC AATTCTCTTC
GTCATTTGGG CCAACAGGAG GAGGCCCTAG
|
|---|
| Protein sequence | MRLVVLLTLA AFLVLAVGPI RLEVQSVLVS PVNTTLIVDY VKAAKKAVYM EVYVFTYKPL
ADALASAAKR GVDVVVVLSA RVYGGVPQSA KEIASYLEAN GVKVKWNSDF PNVHTKLYVI
DNETVIIGNI NPTASGFTKN KGIMLVIKNA TLARQLATIV LNDYRGVYPR YNYPGVLVSP
INSQDGLLWI LSQPGVRYIA MEQIYVDSGL VPYIVNGPYY AVVARTDADI NTAVDEDLVA
KIIVVGNYVY VGSINIGYYS IQRNREVGLL IENPGLAQRL KTLVMKWYQE AGGKVETTTE
ASTATAPPST STTPKAQNAG RSYSLDVLIW LAIIIIAILF VIWANRRRP
|
|---|
| |