Gene Pcal_0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0784 
Symbol 
ID4910292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp752597 
End bp752995 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content61% 
IMG OID640124533 
Productmethyltransferase type 11 
Protein accessionYP_001055676 
Protein GI126459398 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGC TGGGTGGGGA AGCACTACGC GCTATTTGCT CTCCCGGGGG GTTGAGAGTA 
TGCGCCGTGG ACATTGACCC AGGCGCGGTT ATTTATCTAA AAAAGGCGCT TAGAGAATTT
GTCGAGCTGG GACTGCTCGA CGTGCGGCTG GGGGCCGCCG AGGCGCTCCC CTACGGCGAC
AAGGAGTGCG ACTCCGCCGT GTCTGTAGCC GCGTTGCACC ACTTTAGGGA CATCTATGCT
GCCTTGAGAG AAATGGCCAG AGTCACCAGA AGAGTCGTCG TTGTGTACGA CTGGACTCCA
AACGCAAGCG GCGTGACAAA CCCCCACAGC GCCGAGGAGC TTAGGAGAAA GATGGGGGCC
GACCTCGCCG CGGCGAAGTC GCTCGGCTAC GCGGTCTAA
 
Protein sequence
MSALGGEALR AICSPGGLRV CAVDIDPGAV IYLKKALREF VELGLLDVRL GAAEALPYGD 
KECDSAVSVA ALHHFRDIYA ALREMARVTR RVVVVYDWTP NASGVTNPHS AEELRRKMGA
DLAAAKSLGY AV