Gene Pcal_0756 details

Gene Information

• Locus tag: Pcal_0756
• ID: 4908963
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 712157
• End bp: 714094
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640124505
• Product: hypothetical protein
• Protein accession: YP_001055648
• Protein GI: 126459370

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 0.00608077
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGATCTCCT GGCTTCGCAA CTACTACAAG TCTGTCCCCG CCATCCTCTT CATAGTGCTA 
CTCGCAGGCG TAGCCTTCCC ACCGCTCTTC TTGGCGGTCG CCGTCGGCAT ACTACTCGTC 
GGCGAATACC TCTTCCTCAG ACTGTCCAGA GAGCCTCTTG AGCCAGAGAA AGAGGAGCGC 
AAGCTGGGCG ACGTCGCCGC CTCATACGAC CCGCGTCGCC GTTGTTATCA CTTCTTCTGG 
CGAGTAGAGC CCCTCTACAC TGCCCTGGGA AGGGAGGCGC TGCCATTGGT ACACCACATG 
TTGAACGCCG CGTCGCTTAG GGAAAACGAG GCACTCGCCT ACATCCACTC GTACTCCAAG 
TACCTACGGT TCACAGTCTG CAAAACCGAC GAAGACACGG CGCTGAGGAG GGCACTGGAG 
GTGGAGGAGG GCCTCAAGAC CCTCTTCGTC ATGAAGAGGG TAGAGGAGCC GCCCCTCTGC 
TCTATCAAGA AGCCTCCCCG CGCCCCGCTT TACATCGCCG CCGTAGTCCT CGCCGTGGTT 
GCCCTAGCCT CCACAGCAAG CCCCTACATC GCCCCTCTGC CCCGCTGGGC CGCCCCGCTC 
TTCGCCTTGC CCACCGCCCT CGCCCTCTGG GCTAAGTGGA GGTGGTTCGA GAGGGCGTAC 
TGCGTCTCTC CCCTGCCCCT AGAGGCCATG TCCTATAGGT TTGACGACCT TGACCAGAGG 
GCGGAGGCCC TCGACGGAAA CGCTGTGCAG GAGGCGTCTT CCCTCAGCCG CGCGATGGGG 
CACTGGGCCG TCGTCTTTAA GAAGATGCCC GAGGCCGTCG CCTACCAAAA ATACGGGAGG 
AAGCTGGTGT CGATTAGGGA GGACGAGAAG ACTACGCGGG AGGTGCAGAA GTACTTGGCC 
ATGCGGGAGA GGATTCAGAG GGGGGAGTCC TACATCTACG TCAAAGTGTT CGGCGAAGCC 
GACTACCACG GCACCACCAC CCACTTGCGG AAAGACCCCA TCTCCACCGC CGTGTTTTGG 
CAGCTAGACC TCTGGCACGA CGCACTTTCG GGCGGCCTAA CCCGCTTCCC CATCTTCTAC 
GGCGGCGCCC ACCTGGAGAG CGGAAAGAGG TACGTGACGC TGGGCGAGGA GCACGTGACG 
AGGAGAGAGG TGACAATAGA CGTGGACTCC CTCCCCGCGC CGCACTTGTT GATATTCGGC 
GGGTCTGGAA TGGGGAAATC GAAGACAATG GCCTGGCTGT TGAGGCAGTT CCGGGACAAA 
GGAGTTAGAA TCGCAATTAT CGACCCCCAC GGGGACTACC GCTGTACTGC TGAGGAGTTC 
GGCCTTGTGG ACCTTCCCAA GAACGCCCTG CCTCCCCTCG ACGAGGCGTC CTACGCCAAA 
ATCGCCGCTG AGTTCGGCAT GTCCGCCGGC GAGGCGTTGG AGAAGCTTGG CTTCAAGGTG 
CTGAGAGAGG TGCCGGAGCA GTACAGAATA TCGCTCTTGG GCCTAGACCC GCTACGCCAA 
TCTTTCTTGG TGACGGCGTG GTTGTTGTAC GAGTTGAACA GGGTGAAGGA CGAGCACAGG 
GAGAGGCTTG AGCGGGTCGT TGTGGTGGAT GAAGCATACC TCGCCAGGGG GCCCGTCCTT 
GAGATGCTGG AGTTTATGGC CCGGGGCGCT AGAAAGTTCG GAATGGCCGT CTTCCTCATC 
ACCCAGATGC CCGGCGACAT ACCCGAGGCG CTTAGGAACA TGGCCTCCCT AATGCTGGTA 
TTCGGCGGCA ATTGGACGTA TTTGAACCAC GTCCGCGAAG TCCTTCGCCT AACGGCAGAC 
GACATGTCCT GGCTTATGAC TGGGAGGGCG CCGAGGGAGA CCGGCGGCAT GGTAAGAGTG 
CTGGCGGTAC TCGCGCCTGG CTCAATCAAG AAGAAGCTGG AGATACAGCT CCCGTCAGAC 
GTCTTCGAAT GCGCATGA 

 

Protein sequence

MISWLRNYYK SVPAILFIVL LAGVAFPPLF LAVAVGILLV GEYLFLRLSR EPLEPEKEER 
KLGDVAASYD PRRRCYHFFW RVEPLYTALG REALPLVHHM LNAASLRENE ALAYIHSYSK 
YLRFTVCKTD EDTALRRALE VEEGLKTLFV MKRVEEPPLC SIKKPPRAPL YIAAVVLAVV 
ALASTASPYI APLPRWAAPL FALPTALALW AKWRWFERAY CVSPLPLEAM SYRFDDLDQR 
AEALDGNAVQ EASSLSRAMG HWAVVFKKMP EAVAYQKYGR KLVSIREDEK TTREVQKYLA 
MRERIQRGES YIYVKVFGEA DYHGTTTHLR KDPISTAVFW QLDLWHDALS GGLTRFPIFY 
GGAHLESGKR YVTLGEEHVT RREVTIDVDS LPAPHLLIFG GSGMGKSKTM AWLLRQFRDK 
GVRIAIIDPH GDYRCTAEEF GLVDLPKNAL PPLDEASYAK IAAEFGMSAG EALEKLGFKV 
LREVPEQYRI SLLGLDPLRQ SFLVTAWLLY ELNRVKDEHR ERLERVVVVD EAYLARGPVL 
EMLEFMARGA RKFGMAVFLI TQMPGDIPEA LRNMASLMLV FGGNWTYLNH VREVLRLTAD 
DMSWLMTGRA PRETGGMVRV LAVLAPGSIK KKLEIQLPSD VFECA