| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0740 |
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| Symbol | |
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| ID | 4908740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 698661 |
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| End bp | 699704 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124489 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001055632 |
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| Protein GI | 126459354 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000523159 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGATGAAA TTGAGGAGCT TCTGAGGGCC GACTTGTGGG AGCTCGGGAG GCGGGCCTTC
GCCATTCGCG CCAAGCTGTA TGGCGACGTG ACTACGTTCA TCTCTAACAT GATTTTGAAT
TATACGAACG TCTGTGTGGT TGGGTGTAGT TTCTGCGCCT TTTACCGCCC GCCGCGGCAC
CCCGAGGTGT ATACCTACAG CGTCGAGGAG GCCGTTAGGA GGGTGTTGGA GGTGGACGCG
CGGTATGGCA TTAGGCAGGT CTTGGTGCAG GGCGGGGTAA ACCCTGAGAT TGGGATTGAG
TACTTTGAGG AGCTTTTTAG GAGGATTAAG GAGAGGGCGC CGCACATCGC CATTCACGCC
TTATCGCCCC TTGAGGTAGA CTATCTCTCT AGGCGGGAGA GGATGTCGTA TAGAGAGGTG
TTGGAGAGGT TGAAGGAGGC TGGGATGGAG TCTATGCCTG GGGGTGGCGG GGAGATTCTC
GTGGACGAGG TGAGGCGGTT GATTGCGCCG AGGAAGATAG ACGCGGAGAC TTGGCTTAGG
ATTATGGAGG AGGCTCACAG GTTGGGCATT CCCTCCTCTG CCACAATGAT GTACGGCCAC
GTGGAGAGCC TCCGCGACGT GGCGTTGCAC ATGCGCAAGA TCGCAGAGCT TCAGGCCAAG
ACTGGGGGCT TCATGGCCTT TATCGCGTGG AACTTTGAGC CGGGGACTAG CGAGCTGGGG
AAGAAGATCC CCTACCCAAA GACTTCGGCG ACTCTGCTCA GGATGGTGGC GGTGGCCAGG
ATCGTCTTTA GGGACCTCAT ACCGCACATT CAGACGGGGT GGCTCACCAC GGGCCCCGAG
ACGGCCCAGT TGGCCATGTA CTTCGGCGCA GACGACTTCG GGGGGACGCT GTACGAGGAG
AAGGTCCTCG AGTGGAAGAG GGCCGAGGCC CCCATCGACC GGCGGGAGGA CGTGGCAAAA
CTCATAAAGT CGGCTGGGTT CAGGCCGGCG GAGAGAGACA ACCTCTACCG CATTATACCC
GGCGAGGAGT ACCGAAAAAC GTAA
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| Protein sequence | MDEIEELLRA DLWELGRRAF AIRAKLYGDV TTFISNMILN YTNVCVVGCS FCAFYRPPRH
PEVYTYSVEE AVRRVLEVDA RYGIRQVLVQ GGVNPEIGIE YFEELFRRIK ERAPHIAIHA
LSPLEVDYLS RRERMSYREV LERLKEAGME SMPGGGGEIL VDEVRRLIAP RKIDAETWLR
IMEEAHRLGI PSSATMMYGH VESLRDVALH MRKIAELQAK TGGFMAFIAW NFEPGTSELG
KKIPYPKTSA TLLRMVAVAR IVFRDLIPHI QTGWLTTGPE TAQLAMYFGA DDFGGTLYEE
KVLEWKRAEA PIDRREDVAK LIKSAGFRPA ERDNLYRIIP GEEYRKT
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