| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0711 |
|---|
| Symbol | |
|---|
| ID | 4908256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 673198 |
|---|
| End bp | 673512 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640124460 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001055603 |
|---|
| Protein GI | 126459325 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0011] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00106] uncharacterized protein, MTH1187 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000000813715 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA TGATAGTAAG CTTCTCCGTA GTCCCCATCG GCACGGGAAG CCCAAGCGTC
TCAAAATACG TACAACGCGC CACCCAAATC CTCAGACAAA AGGGCTACCG CTACAAGACA
GGCGCCGGCT TCACCGACGT AGAACTCGAC GACTACAGCC AGCTGGCAGA CCTACTACAG
GCAATAGAAA AGGCCCTCAC CGACATGGGC GCCCAGCGGA TACTCTACAC CATAAAAATA
GACCGCAGAC TAGACAAAGA ACTCCACATC GACGAAAAAA TCGCAAAAGC CGAAGCTACT
GCAGAGCGGC CTTAA
|
|---|
| Protein sequence | MAKMIVSFSV VPIGTGSPSV SKYVQRATQI LRQKGYRYKT GAGFTDVELD DYSQLADLLQ
AIEKALTDMG AQRILYTIKI DRRLDKELHI DEKIAKAEAT AERP
|
|---|
| |