| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0691 |
|---|
| Symbol | leuS |
|---|
| ID | 4908582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 651138 |
|---|
| End bp | 653978 |
|---|
| Gene Length | 2841 bp |
|---|
| Protein Length | 946 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640124440 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_001055583 |
|---|
| Protein GI | 126459305 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00395] leucyl-tRNA synthetase, archaeal and cytosolic family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000845004 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGC TTGCCAAGTT CTTTATCGAG GTGGCGGAGA AGTGGCAGAG GAGGTGGGCC
GAGGCCAAGG TGTTTGAGCC CTCGCCGCAG CCTGGGAGGC CTAAGTTCTT CATAACGGCG
GCGTATCCCT ACCCCAACGG GACTATACAC ATTGGCCACG GCAGGACATA CCTAGTCGCA
GACGTAATGG CGCGCTTCCG CCGCCACCTG GGCTACAACG TGCTGTTCCC CATGGCCTTC
CACTACACCG GGACCCCCAT TTTGACCATC GCCGAGGTCA TCGCCGCTGG GGACAAGGCC
GTCATAGAGG AGTACAAGGA GATATACGGC GTGTCAGACG ACGACATTAA GAAGATGGGG
GACCCGCTCT ACTTGGCGCA GTACTTCCAC CGCAGGTCTA AGGAGGCAAT GATCAAGTTC
GGCCTCGGCA TTGACTGGAG CCGGGAGTTT ACCACGATTG ACCCAGAGTA CCAGCGCTTT
ATCCAGTGGC AGTTTGAGAA ACTGAGGAAG AGGGGCCTAA TTGTGAGAGG GAGGCACCCA
GTGGGGTGGT GCCCGCGGCA TCAAATGCCC GTGGGGGCCC ACGACACTAA GGACGACAAA
GAGCCCGAAA TCGGCCAGTG GACTCTCATA TACTTCGTTG ATGGGGAGGG CTTGGTGTAC
CCCACGGCTA CTCTCAGGCC TGAGACTGTG CCCGGCGTGA CGAACATCTG GATTAACCCG
GACGCGGAGT ACGTAGTGGC CGAGTTCGAG GGGAGGAAGA TGGTGTTGAG CAAAGACGCG
GCGTATAGGC TCTCCTTCCA AGGCAACGTC AAAGTGATTA GAGAGGCCAG GGGGAGAGAG
TTCGTGGGCA GGCGGGTGTT AAACCCAGTG ACGGGGGAGT GGGTGCCGGT CTACGAGGCC
AAGTTCGTGG ACCCCAAGGT GGGGACTGGG GTAGTGATGT CCGTGCCCGC CCACGCGCCG
TACGACTACG CGGCGCTGAG GGACATGGGG GAGGTGAAGC TCATCCCCCT GATAAGGGTG
GAGGGGTACG GCGAGTACCC CGCCAAGGAG GTGGTGGAGC GGATGGGGAT AAAGAGCCAG
ACCGACCCAG CCCTCGAGGA GGCGACTAGG GAGGTCTACT CCGCGGAGTA TACGAGGGGC
GTGGTTAGAG AAGACGTGGT TGACCGCATA GCGCCTCACC TCCCCGAGCC CGCGAGGTCT
ATGGTGAGGG CCGTGTTTAA GCTGTACTTC GCCGGGAGGC CTGTGAAAGA GGCGCGGGAG
TTCATTTCCA AGTGGCTCGC CGAGGCTGGG CTAGGCGGCG TGATGTACGA CATAATGAAC
AAGCCGGTGT ACTGCAGATG TGGTACTGAG ATCGTGGTGA AGGTGCTGGA GGACCAGTGG
TTTATAAACT ACGGGGAGAG GGGCTGGAAG CAGTTGGCGA GGCAGTTGGT AGAGGAGATG
GCCATAATTC CGCAGGAGGC CAAGGCCCAG TTCTTGGCCA CCATAGACTG GCTGGATAAG
AGGGCCTGCG CCAGGACTAG GGGGCTGGGC ACGCCTCTGC CGTGGAGCCA GGGGTGGGTT
ATCGAGAGCT TAAGCGACTC CACCATCTAC ATGGCCTTCT ACACGGTCAT CAAGAAGATC
AGGGCCCTGG GGCTGAGGCC GGAGCAGTTG ACAGAGGAGT TTTGGGACTA CGTGTTCCTC
GGCCAGGGGA GCGCGGCAGA GGTGGCGAAG AGGATAGGCG TAGACCCCGC GGCCCTTGAG
GAGATTAGGC GCGAATTTGA CTACTGGTAC CCCCTGGACT CTAGGAACTC GGGCAAAGAC
CTCATACCCA ACCACCTCAC CTTCTTCATA TTCAACCACG TGGCCATCTT CCCCAGGGAG
AAGTGGCCAA GGCAGATCGT GGCCAACGGC TGGGTGCTGA GGGAGGGGGA GAAGATGTCT
AAGTCTAAGC GGAACGTCTT GCCCTTGGAC AAGGCGGTGG CGTTGTACGG CCCAGACCCG
CTCCGCGCCA CGTTGGCAAT AGCGGCGGAG GTGGAGCAGG ACCTAGACTT CAGAGACGCA
GAGGCGAGGA GAAACTCTCA GCAGCTCATG TCTATCTACA ACCTCGTGCA GAGGCTGGCG
CAGAGCGCCG TGGAGAGAGA GGAGACTTGG CTTGACAAGT GGCTGATCTC CGAGGTGGCG
CACGTCCTCG AGAGGGCTAG AGAGGCGTAT GAGAAAGTGA GGCTGAGGCA GGCCGCCGTG
GAGCTGTTGT ACAACGCCGA GGCCGTCTTT AGCCAGTACC TCTCCATGGT GGACAAGCCG
TCTAAAAGCG CGGTGGAGGC CGCCAAGGCG TGGGTAGTGG CCCTGGAGCC CATAGTGCCG
CACTTCGCCG AGGAGCTCTG GCAAATTCTC GGTGGCGAGG GGTTTGCCGC GACGGCGCCT
TGGCCAAAGC TGAGCCCAGA CCCAGCCGCC CTCTTGGCCA AGAGGTATGT GGACATGTTG
ATTGAAGATG TGAAAAACAT CCCCGCATAT AAGGCCGGGG CGAAGAGGGT GGCGATATAC
GTCAACGGCA ACTACCAGTG GCTGAGAGCC GCCGTGGGGA AAGACGTCAA GGCGGCCATT
GAGGCGGGAG CCCCGCCCCA GTTGGCCAAG AGACTCGTAG ACTTCGCCAA GTCCATGGGC
GAAGAGGTGA GGGGGCTCGT AGAGCGCGTG GAACAATTCG ACGAATACGC CGCCCTCCAG
TCGTACAAGA GGTACGTAGA AAAGGCGCTT GGAGTTCCAG TGGACATATA CAAGGCAGAC
GACCCCCAGG CGCCAGACCT AGGCGGAAAG AAGAAGGCGG CGCTACCCCT AAAGCCCGGC
ATATTCATAG AAGTAGGCTA G
|
|---|
| Protein sequence | MSELAKFFIE VAEKWQRRWA EAKVFEPSPQ PGRPKFFITA AYPYPNGTIH IGHGRTYLVA
DVMARFRRHL GYNVLFPMAF HYTGTPILTI AEVIAAGDKA VIEEYKEIYG VSDDDIKKMG
DPLYLAQYFH RRSKEAMIKF GLGIDWSREF TTIDPEYQRF IQWQFEKLRK RGLIVRGRHP
VGWCPRHQMP VGAHDTKDDK EPEIGQWTLI YFVDGEGLVY PTATLRPETV PGVTNIWINP
DAEYVVAEFE GRKMVLSKDA AYRLSFQGNV KVIREARGRE FVGRRVLNPV TGEWVPVYEA
KFVDPKVGTG VVMSVPAHAP YDYAALRDMG EVKLIPLIRV EGYGEYPAKE VVERMGIKSQ
TDPALEEATR EVYSAEYTRG VVREDVVDRI APHLPEPARS MVRAVFKLYF AGRPVKEARE
FISKWLAEAG LGGVMYDIMN KPVYCRCGTE IVVKVLEDQW FINYGERGWK QLARQLVEEM
AIIPQEAKAQ FLATIDWLDK RACARTRGLG TPLPWSQGWV IESLSDSTIY MAFYTVIKKI
RALGLRPEQL TEEFWDYVFL GQGSAAEVAK RIGVDPAALE EIRREFDYWY PLDSRNSGKD
LIPNHLTFFI FNHVAIFPRE KWPRQIVANG WVLREGEKMS KSKRNVLPLD KAVALYGPDP
LRATLAIAAE VEQDLDFRDA EARRNSQQLM SIYNLVQRLA QSAVEREETW LDKWLISEVA
HVLERAREAY EKVRLRQAAV ELLYNAEAVF SQYLSMVDKP SKSAVEAAKA WVVALEPIVP
HFAEELWQIL GGEGFAATAP WPKLSPDPAA LLAKRYVDML IEDVKNIPAY KAGAKRVAIY
VNGNYQWLRA AVGKDVKAAI EAGAPPQLAK RLVDFAKSMG EEVRGLVERV EQFDEYAALQ
SYKRYVEKAL GVPVDIYKAD DPQAPDLGGK KKAALPLKPG IFIEVG
|
|---|
| |