| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0618 |
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| Symbol | |
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| ID | 4910273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 582329 |
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| End bp | 583837 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124367 |
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| Product | peptidase M50 |
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| Protein accession | YP_001055511 |
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| Protein GI | 126459233 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCCGC TAGTGGCCTT CTTGGTGAGC TGGTTCGCCG TGGTGGGGAT AGTCTACGCG
GTGAATAAAA ACGCGGTTAG GTACTTCGTG GCCATATACT GGAAGACCGA GAGGCTTAAC
CGGCGTATAG AGGGGCTTGT GAAGAGGCTC AGTTTTGTGC CGCTCAGGGC CTATCTGGCG
GTCGCCCTCG TCCTCGCCCT TGCGCCAATC TTTATAGCAA TGCCGTTTGT GAGGCCGGAC
GGGCAAGTGC AGGCGTTGCC CGGCTTCTTG TACATGCTCA TCGGCGGCAC AGTCACAGCC
GTTCAGACTC TGCTCAGCGG AGCCCCTGTG GCCGAGGCGG CCTCGCGGTC AGCAGGAGTC
ACCCCCATAA TACCTGGCGT GACTCTCCCC TGGGGGCAAC TGCCCTACTT GGCTGTGGCA
ATAGCCGTGG GAGTGGCGCT TCACGAATTT ATGCACGCCT ATGCGGCTCT GAGGTATGGA
ATCCCCCTGC GGCACGTCGG CGTCTTCTCC TTCTTCTACA TAATAAGCGG CGCCTTCGTG
GAGCCGGATG AGGAGGCGTA CAAGAAGAGT GGCGTCGAGG CCAAGGCCGC TGTGTTGGCC
AGCGGGGTGG CGGCAAACGT GGCCTTGGCG TTCTTGGCCA TGCTTGCGGG GGTTGCGGGT
GCTTGGGCCG GGCTTTATGG GGCCGTCTTT GGAGTCTCCG CATTCGGCGT AGATGCCGGC
GACCGCGTAT TAGAGATAAG GGGCTGCGGC TTGGCCGAGA GGGTGTATAC GCCGGACGAC
TTTATAACCA AAATCAACGT GTTGGCGGGC ATGGGGCCCC TCATGGGCAT TAATAAGACG
GCGGCGTGTA AGCCAGGCGA CGAGGTGACA CTAGTAGTGG GGAAGTGGTG GGGCACATAC
GAGGTAAAGC TAGACTACTC AAACTTCACC ACGCCGCCGA GGATCAACTG GCTTTTCGAA
GACGGCTCTT TGTACAAGTC AGGCGTTAGG CCAGGGGACG TCGTAAAAGC AGTAGAGGGA
TGCGGCGTCC GCGAGGAAAT AAGATGGGGC GGCCAGCTGC TTTCCACCTT GCTCTCTCTT
AAAAAGCTTT GCAGGCCAGG CGACGTGATA AGAGTAGCAG TGGAGAGAAA CGGCACCACT
GTGGCGCTGA ACGTGACCCT CGTGGGGAAG GGGGGAGAGG TGTACTACGG GCTAGGCCCT
GGAAGCCTCC CGATGCTAGG CTACGACGCG GGCCCCATAA AGGCAAGCGA GATCTACAAC
ACCGAGTTTA CAAAGTTTGT ATTCTGGTTT CTCGTGGTCA ACTACGGCTT AGCGGTGGTG
AACGCCCTCC CAATATATCC ACTTGACGGA GGCCAGCTTG TGGCGGCTCT GGCGCAGAGG
AGGCTGGGAG AGAGGAGGGG GCAGCGGTTG GTGAACGCCT TGTCTGTGGT TTTAGCCGCC
ATGCTTATCT TCAACCTCGC CCTGGGAGTA CTCGGCGAGC AGTACAGAGT GCTTCAGATG
ATCAGATGA
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| Protein sequence | MDPLVAFLVS WFAVVGIVYA VNKNAVRYFV AIYWKTERLN RRIEGLVKRL SFVPLRAYLA
VALVLALAPI FIAMPFVRPD GQVQALPGFL YMLIGGTVTA VQTLLSGAPV AEAASRSAGV
TPIIPGVTLP WGQLPYLAVA IAVGVALHEF MHAYAALRYG IPLRHVGVFS FFYIISGAFV
EPDEEAYKKS GVEAKAAVLA SGVAANVALA FLAMLAGVAG AWAGLYGAVF GVSAFGVDAG
DRVLEIRGCG LAERVYTPDD FITKINVLAG MGPLMGINKT AACKPGDEVT LVVGKWWGTY
EVKLDYSNFT TPPRINWLFE DGSLYKSGVR PGDVVKAVEG CGVREEIRWG GQLLSTLLSL
KKLCRPGDVI RVAVERNGTT VALNVTLVGK GGEVYYGLGP GSLPMLGYDA GPIKASEIYN
TEFTKFVFWF LVVNYGLAVV NALPIYPLDG GQLVAALAQR RLGERRGQRL VNALSVVLAA
MLIFNLALGV LGEQYRVLQM IR
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