Gene Pcal_0604 details

Gene Information

• Locus tag: Pcal_0604
• ID: 4909118
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 567373
• End bp: 567954
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640124352
• Product: hypothetical protein
• Protein accession: YP_001055497
• Protein GI: 126459219

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAGTTAA AAGAGGCTAT TCTGCAACTG TTGCGCGAGA AGGGTGAATT GACCACATCT 
GACATTGTAG CAATCCTCGG CCAGCCGAGA CACCGCGTTC TAAAGATATT GAACAAGCTG 
TACTTCGAGG GGACAGTAGA GCCCGTCAAG AAAAATAGGA AGTACTACTG GCGCCTTGCC 
TCAGGCTATG TGGCAGTTGC GCCGTTGCAC TTCTCCATAG AGCCTGTGTT ATACATAGAA 
GGAGTAGTAG AGCCCATATA TAGAAGAGTA GATGACAGAG TTGACACATT CATATTCACA 
AGGGTAAGAG ATAAGGAGTA CTGGATGTGT GACTGCTCCA CTGGGTACTA CATAATTTCT 
GACCAGCCAA TAGATGGGTG CAGCTGCAAG CTTAGACACG CATTCGGCGA GAGGAAACTG 
GCAATGATAT ACCTACCCAA GGAGCTGAGA TTCAGATACT GGAGATCGTA CAGATACGCC 
GAGGGAGACG TGGAGTTCGT AATACTGGTG CCCGAGGACC AAGACTCGCC CGAGCTCGTG 
AAAAAGTTTG AGAGCTACTC AAAGGAGGTT AAAACCAGTT AG 

 

Protein sequence

MELKEAILQL LREKGELTTS DIVAILGQPR HRVLKILNKL YFEGTVEPVK KNRKYYWRLA 
SGYVAVAPLH FSIEPVLYIE GVVEPIYRRV DDRVDTFIFT RVRDKEYWMC DCSTGYYIIS 
DQPIDGCSCK LRHAFGERKL AMIYLPKELR FRYWRSYRYA EGDVEFVILV PEDQDSPELV 
KKFESYSKEV KTS