Gene Pcal_0592 details

Gene Information

• Locus tag: Pcal_0592
• ID: 4908440
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: +
• Start bp: 556350
• End bp: 557027
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640124340
• Product: putative RNA methylase
• Protein accession: YP_001055485
• Protein GI: 126459207
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1041] Predicted DNA modification methylase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGAGACGT GCAGAGTTGA GGTAAGTAAA CGCTTCCATT GTCTAGCCGT AGAAGAGGCA 
CTTGCGTTGG CCGAAATAGG TGGCTGTGTC CTTAAAGAGA GAGGGGAGTC GTTAGAGTTT 
GTTTGCCCCT CCTGTCAAGT ATTTCACAGG TCTGCTCTCA TTAAGTCGGT TAATGGAGAG 
AGAATTAAGA GGCATTTACC CACGCTTGTG AGATCTCCAA AAACGCTTGA CTACGTAACG 
GCGCGTCTAT TGGTAAACTT GGCGAGAGTT ATGCCGGGTA GCGTCGTATG GGAACCTTTT 
GTGGGCACAG GCGCGATAGC GTACGAAGTA GAGAGAGTGG GGGGACATGT GGTGGGCACA 
GATGTGGATC TGGGGGCTTT GCGCATCGCC AGGCTAAATG TGCGGGGCGA CTTACTGCTC 
TCAGACGCTT TGAGACCCCC ATTTTCAAAG GTATTTGACG CGGTTGTGGG AGATCCGCCG 
TATGGCCGTC TTACAAAGTC TACGATGGAA GTCAGAGCTC TGCTTAACGC GTTTATAGAA 
GTGGCCTTTT CTCATGTTAA AAGGGGCGGA TACGTCGTAT TGGCGTCGCC CATCTACGTA 
GATTTGCCAT ATCTGAGGAG CTGTGTGATG TATTTACACG GCGGCCTCTA TAGAGTTGTG 
TATTTTGTAA AACTCTAG 

 

Protein sequence

METCRVEVSK RFHCLAVEEA LALAEIGGCV LKERGESLEF VCPSCQVFHR SALIKSVNGE 
RIKRHLPTLV RSPKTLDYVT ARLLVNLARV MPGSVVWEPF VGTGAIAYEV ERVGGHVVGT 
DVDLGALRIA RLNVRGDLLL SDALRPPFSK VFDAVVGDPP YGRLTKSTME VRALLNAFIE 
VAFSHVKRGG YVVLASPIYV DLPYLRSCVM YLHGGLYRVV YFVKL