| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0589 |
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| Symbol | |
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| ID | 4908785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 553566 |
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| End bp | 554285 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640124337 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001055482 |
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| Protein GI | 126459204 |
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| COG category | [K] Transcription |
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| COG ID | [COG1709] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAACG AACACAGACA CATAGCAATC TATATAGCCG GCGACATAAT TACATCGGAC
AACCCAGGTG AGGTGATAAA GAAGTGGAGA CTAGTCTTTG GACTTACTCA GACTGCCTTA
GCCACTCGAC TGAACACCTC GCCGAGCGTT ATCAGCGACT ATGAATCGGG CAGGAGAAAG
TTCCCCGGCT CGCGGTTCAT CAGGAAATTT GTACAAGCGC TAATAGAGGC GGATCTTGAG
CGAGGCGGCC ACGTCTTAAA TCTACTCCAG CGCCAGCTGT TAAGAGAGAG ATTTTGGACA
GCTGTAATAG ACATGAGAGA ATTCACAGAG CCTGTGCCCA TTTCTACATT TTTACAAAGC
ATAGAGGCAG AGGTTTTAGT GCCGCCTCCG CAGACCTTGG ACATATATGG CTACACCATC
GTGGATAGTG TAAAACTAGT CTTAGAAGTC CCTTCAGTAG AATACGTGAG ATTGTACGGA
GGCACGTCGC AACGTGCCGC AATTTTTACA AAGGTATCCA CAGGCCGCTC CCCCATAATA
GCCATAAAAT CTATGTCTGC CGTATTAAGC GTAAAACCCT CCATAGTAGT GCTCCACGGG
ATAAAGCAAG AAACTGTTGA CCCCTTGGCT GTGGAAATTG CAAAGAGGAG CTACATACCT
CTAGCTGTTA CAAACATAAC ACTTGAGAAA ATGATTGAAA ATTTACGACG ATTTAAGTAA
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| Protein sequence | MDNEHRHIAI YIAGDIITSD NPGEVIKKWR LVFGLTQTAL ATRLNTSPSV ISDYESGRRK
FPGSRFIRKF VQALIEADLE RGGHVLNLLQ RQLLRERFWT AVIDMREFTE PVPISTFLQS
IEAEVLVPPP QTLDIYGYTI VDSVKLVLEV PSVEYVRLYG GTSQRAAIFT KVSTGRSPII
AIKSMSAVLS VKPSIVVLHG IKQETVDPLA VEIAKRSYIP LAVTNITLEK MIENLRRFK
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