| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0579 |
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| Symbol | |
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| ID | 4909734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 546340 |
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| End bp | 547656 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640124327 |
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| Product | isocitrate dehydrogenase (NADP) |
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| Protein accession | YP_001055472 |
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| Protein GI | 126459194 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATAA ATCTAGATAA GCTTAGAGAG TCTATACCAA ACCTCGTACC GTACAACGGT
AAATACGTAG AGCCGCCAGA GGGGGAATAC GTCCAATACA CAGGCCCCGG CCAGTTAAAA
GTCCCCGACA AGGTGGTAAT AGGCTACATA GAGGGCGACG GAATAGGCCC CGAAGTCGCC
TACGCGGCAA TAAGAGTAGC CAACGCCGCG GTGGAAAAGG CATATGGAAA AGCCAGGAAG
ATAATATGGT ACGAAGTGGT GGTCGGCGAA AAAGCTGAAA AGCTCTTTGG GAACAGGCTC
CCTGACCAGA GCATTGAGGT TTTGAAAAAA GTCAAGGTCT TTCTCAAGGC CCCATTAGAG
ACCCCGGTTG GCGGCGGGTT TAGAAGCATA AATGTGACAC TTAGACAGCT ATTCGACCTA
TATGCCAACA TAAGGCCTGT CAAATACTTC CCAGGTCTCC CGTCGCCACT GAAAAAGCCG
CAAGTAGATT TGGTTATATT TAGAGAGAAT ACTGAGGACG TATATGCAGG AATTGAGTGG
CCTTATAATA GCCCAGAGGC CGCCAAGCTA AGGGAATTTC TCAAGAGAGA ATTCGGCATA
TCAATAAGAG ACGACGCGGG CATAGGGATT AAGCCCATAA GCAAATTTGG CACCCAGAGA
ATTGCGAGAC TCGCCCTTAA ATTCGCCGTG GAAAACAAGA GGAGAGTGGT CACCGTCATG
CACAAGGGAA ACATCCAGAA GTACACCGAG GGGGCGTTTA GAGAGTGGGC CTTTGAAGTC
GCTAGGAACG AGTTTAGAGA CTACGTGGTG TTTGAAGACG AGCTAGCCCA ATACGGAGGA
AAGGTGCCAC CTGGAAAAAT CCTTGTTAAC GACAGAATAG CCGACAACAT GCTTCAGCAA
CTTCTCACAC GTACTAACGA ATATGATGTA ATACTTGCAC CTAACCTGAA TGGAGACTAT
GTAAGCGATG AGGCGGCAGG CCTAGTGGGA GGGCTAGGAG TAGCCCCCGG CCTCGATGTC
GGCGACTGGG GCATGATGGC AGAGCCAGTA CACGGAACGG CGCCCAAGTA CAGAGGAAAG
AACTATGTAA ATCCCACTGC CACGATCTTG GCCCTAGAGC TATTGCTCAG ATTCATGGGC
TGGAGAGAGG CCGCAGACTT GATAATGAAG GGGATAGAAA AGGCGTACAC AGAAGGCTAC
TTCACCGGCG ATTTAGCAAG ACAAATGGAC GAAGAGGAGA GAAAACAACG GGTAAAAGAA
GTCTTAGGCA CACAAGAATT TGCCGACAAA GTAGTAGAAT TAATAAAGGA ATTATAA
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| Protein sequence | MSINLDKLRE SIPNLVPYNG KYVEPPEGEY VQYTGPGQLK VPDKVVIGYI EGDGIGPEVA
YAAIRVANAA VEKAYGKARK IIWYEVVVGE KAEKLFGNRL PDQSIEVLKK VKVFLKAPLE
TPVGGGFRSI NVTLRQLFDL YANIRPVKYF PGLPSPLKKP QVDLVIFREN TEDVYAGIEW
PYNSPEAAKL REFLKREFGI SIRDDAGIGI KPISKFGTQR IARLALKFAV ENKRRVVTVM
HKGNIQKYTE GAFREWAFEV ARNEFRDYVV FEDELAQYGG KVPPGKILVN DRIADNMLQQ
LLTRTNEYDV ILAPNLNGDY VSDEAAGLVG GLGVAPGLDV GDWGMMAEPV HGTAPKYRGK
NYVNPTATIL ALELLLRFMG WREAADLIMK GIEKAYTEGY FTGDLARQMD EEERKQRVKE
VLGTQEFADK VVELIKEL
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