| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0541 |
|---|
| Symbol | |
|---|
| ID | 4908925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 513908 |
|---|
| End bp | 514405 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640124287 |
|---|
| Product | dual specificity protein phosphatase |
|---|
| Protein accession | YP_001055434 |
|---|
| Protein GI | 126459156 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAGT GCCCCTACTG GGTCGACGAG CGAGTAGCCG GCTCCTGCAT GCCGAGGAGA
GACGACGTAG ACAAGTGGGC AAAGGCCGGC ATACGCACAG TCATAACGCT GGCAGAGGCG
TGGGAAGTGG AGTACTACGG GCGGTGGGGG CTTCTCGAGT TTAGAAGAGC CCTCGAGGAG
AGGGGCATAG AGTGGATACA CTGGCCAACG CCAGACGGCT ACCCGCCCAG GGGGCTCATT
GAGCTGGTGG AGTTAGTCAA GGCCAAGGCG AGAAGCGGCG CAGTGTTGGT ACACTGCGTG
GGCGGAATGG GGCGCACCCC CACCCTACTC GCGGCATATC TAATAGCTAC GAGATGCCTA
AAAGCCGACG ACGCCATAAG ACACGTTGAG CGGGTAAACC CACACATCTC TCTAACAGAC
CAGCAGTACT ACGCCCTGTT AGAAGTAGAA GCAACATACC GAGACGTGTG CAACATACAG
GGCAAAAACA TTAAATAG
|
|---|
| Protein sequence | MMECPYWVDE RVAGSCMPRR DDVDKWAKAG IRTVITLAEA WEVEYYGRWG LLEFRRALEE
RGIEWIHWPT PDGYPPRGLI ELVELVKAKA RSGAVLVHCV GGMGRTPTLL AAYLIATRCL
KADDAIRHVE RVNPHISLTD QQYYALLEVE ATYRDVCNIQ GKNIK
|
|---|
| |