| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0530 |
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| Symbol | |
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| ID | 4909463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 505649 |
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| End bp | 506731 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124276 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001055423 |
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| Protein GI | 126459145 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTAA TTCTCGCCGC CAGGGCCTTA TACGCCCTTA TGTGGTTCTA CGTGGCCCCA
GTTCTGCCTC AGATGCTTAA AGAATTCGGC GTAGATGCCT CAAGCGCGGG GCTACTCCCG
GCTATGTTCA TCGTCGGGAC AGGGGTTATG CAAATCCCGG CCAGCTACTT GGGGGGCAAG
CTGGGGTTTA ACAAGGTGGC AGGCGCGGGG ATGGCCATCT TCGGCGCCTC TTCTCTCTTG
CTCTCGCTGT CTAATTCGTG GTGGGAGGCC TTGTTGCTCA GGGCGTTGGG GGGCGTGGGG
GCTGGCCTCT TTTTCTCAAC TGCGGGGGCC CTAATTGTGG CGTATATGCC AGATGCCGTT
GCGACGGCGC TGGGGTGGTA CAGCGCGTCG TTCAACATAG GCGCCTTCGT TGGATTTTAC
TGGGGGTACG TGGCCTCGTT GACGGGTTGG CGCCTCGCGT TGGCTATCCC CGGCGCGTTG
GCAATAGTCC TCGGCGTACT AATCTTCAGA GGGCCTCCTC TTAAGGGCGC GTCGAAGTTC
AGCTGGAGGG CCTACTCCTT CGGTCTCGCC TCATTTCCCT TCTGGGGGTC GGTGTATGCC
GCAAACAGTT TGGCCGCTAC GTGGGCCCAC CTCCACAGAG GGGTTGCAGA GAGCGTTGCA
GGCGCCTTGT CCTCCGCGGC AATGGCCTCG GGGTTCTTAG GCGGATTCTT CGGCAGATTA
TACGACAAGA CTCAGAAAAA ACTGCGCTTT CTGACCGCGG CCCCCCTCCT TGCGGCAGGG
GCTTACGCCC TAACCCCCTT TGCCCCAGTT TACGCGCTGT TTCTGCTCGC CTTTACATAC
GGCGCGGCCT TCTCCGCCTA TATTACAGCC ATATACGCAA CTGCGTCAAA AGTTTCACAA
GACCCCTCAT CGGCTCTCGC GGTGGTAAAT GTGACAAATA TGGCGCTGGG CCTACATGTG
AGCTATATCT TCTCCTGGCT AATGGCCTAC TCCCCAGCGC TCCCCTGGGA ATTTCTAGCC
GCGTTGGCTG CCTCTTCTTC TCTGGCCACT TACGCTGTGG CGCAACGGAC AAAGTTTATT
TAG
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| Protein sequence | MRLILAARAL YALMWFYVAP VLPQMLKEFG VDASSAGLLP AMFIVGTGVM QIPASYLGGK
LGFNKVAGAG MAIFGASSLL LSLSNSWWEA LLLRALGGVG AGLFFSTAGA LIVAYMPDAV
ATALGWYSAS FNIGAFVGFY WGYVASLTGW RLALAIPGAL AIVLGVLIFR GPPLKGASKF
SWRAYSFGLA SFPFWGSVYA ANSLAATWAH LHRGVAESVA GALSSAAMAS GFLGGFFGRL
YDKTQKKLRF LTAAPLLAAG AYALTPFAPV YALFLLAFTY GAAFSAYITA IYATASKVSQ
DPSSALAVVN VTNMALGLHV SYIFSWLMAY SPALPWEFLA ALAASSSLAT YAVAQRTKFI
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