| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0520 |
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| Symbol | |
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| ID | 4909195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 495148 |
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| End bp | 497010 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640124267 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001055414 |
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| Protein GI | 126459136 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGTAA TTCTCTTCAC AATTTTCGCA CCGCTCATAA TGTCTATCGT GTCTCTATTT
AGCACTTCTG AGAAGTTCAA GGCCTGGGCC GTGACCTTAG GGACCTTTAT CTCGGCGCTG
TTAGCCACAT ACGCCTACTT CGCCGTATCG CCCGGCGTAT ATGGATTTGA CTGGATCAAG
GCAATAGGCG CTAGAGTCGA GCTGTGGATT AACTGGACTA GTTTGACGAT GGGCCTCTTA
GTGGCGTGGC TTGTAGCCGC AATATCGCTC TACTCCGTTA AATACATGGA GGGGGACTAC
AGGCCGGGGT GGTACTGGTT CTTCTTCGGC TTTTTCGCCA CGTCGATGCT CATAATAGTC
TACGCCGGTA ATCTCTGGTT CTTGCTTGTG GGCTGGGAGG GGGTCGGCCT AGCGTCGTGG
GCCTTAATAG GCCACTGGTA CCGCGACGAA TACGACAAGT GGGTTGGAAA AGAGGAGAAA
GTCGCCGGAG TCCCCTACTG GTGGACGCCC AGCAAGGCGG GACTCCGCGC CATATTAACC
GTCAGATTCG GCGACGCGTT TTTCCTAGTC GCCATAGCCC TATTCTACGT ACTCACGGGT
ACAGTATCTC TAAGCGGGCT CATGTCTCCT CCTGCCCTAG ATGCGCTTAA GCAACTGGGC
GTTGTGCCAC TACTATTCTT CGCCCTAGGG CCGTTCACTA AGTCCGCCCA ATTCCCATTC
CACGAATGGT TGTTGACGGC TATGACAGGC CCCACAAGCG TGTCCGCGCT GATCCACGCC
GCCACCATGG TCAAGGCCGG CGTATATGTG CTCATAGTAA CTGCGCCCAT CTTCGCGGTG
GTCAAAGGCT CCGAGCTGTA TTTCACGGTA GTGATGTGGG TAGGTGTCGC CACGGCTCTC
TTGGCCACAA TAATTGCGTT AACCTCTATG GAGTTTAAGC TAGTCCTCGC GGGCTCTACT
GCGGCCAACC TCGGCATAAT AGCCGCCGCC ACGGGGGCCG CCGGCGTTTT AGGACTGCAT
GAGACACAGT TGTTAAACGC GCTACTGTTC TTCGCCTTTT TGCACATCGT TGGCCACGCA
GTTTCTAAGG CGTCTTTATT CATGGGGTTT GGCGCAGTTA TACACGAGGC CGGCACCAGG
TTTCTCGGGG AGGTTGGAAA ACTCTGGCGC CACATGAAGA TCACCGCAGT GGCCATGGTC
CTCTCTATGT TAAGCTTGGT GGGTATACCG CCCTTTGTGG GCTATATAAC AAAGGACTTG
GCGCTTGAGA ACGTGTTTGA GGCTGGCCAC GTGTTGGGGG TTGAGGCTTT GGCGGCCTTG
TTGTACATCC TCTTGTTCTT GACGCCCATA TATGGGCTAC GCCTCATTGG TCTCACGTTC
TTCCACGGAA AAGAGCCAGA GGAAGTGCAC GAGGCACCAG TTCTAATGTG GCTACCCTAC
ACAGCGCTGG CCCTTGCCAC AATTGTGCTC GGGACCTACT TCGCCGTTTC TATTAAGTTC
CCACTTACGG AGGCCTTAGT CGCCGTGCTC CTCGGCTTTT TAACTGGCTT TGTGTTGTAC
ATAGCGCTTC CTGGGTTTAA GTCTGAGACT TTGAGACCTT TGTGGGAATT TGCATATCGC
AGATTCTACT TGCCCATCTT ATACGACGGC GTATTTCCGT GGCTGTATAC GTGGTTTGCC
AAGTTTATAT TTGTGGTATT CGACAAGGGG CTGTTCGACG GCTTGTACCA CAACGTGTTG
CCGGGCCTCT TCGGCGCTGT GTCCAACTGG CTTAGGCGGC TAGTGGCTGG GGCTTTGAAC
ATATACCTCT TGTACGCCAT CGTGGGGATA TTGATAACAC TCCTCCTCTT GGTAGTGGCA
TGA
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| Protein sequence | MEVILFTIFA PLIMSIVSLF STSEKFKAWA VTLGTFISAL LATYAYFAVS PGVYGFDWIK
AIGARVELWI NWTSLTMGLL VAWLVAAISL YSVKYMEGDY RPGWYWFFFG FFATSMLIIV
YAGNLWFLLV GWEGVGLASW ALIGHWYRDE YDKWVGKEEK VAGVPYWWTP SKAGLRAILT
VRFGDAFFLV AIALFYVLTG TVSLSGLMSP PALDALKQLG VVPLLFFALG PFTKSAQFPF
HEWLLTAMTG PTSVSALIHA ATMVKAGVYV LIVTAPIFAV VKGSELYFTV VMWVGVATAL
LATIIALTSM EFKLVLAGST AANLGIIAAA TGAAGVLGLH ETQLLNALLF FAFLHIVGHA
VSKASLFMGF GAVIHEAGTR FLGEVGKLWR HMKITAVAMV LSMLSLVGIP PFVGYITKDL
ALENVFEAGH VLGVEALAAL LYILLFLTPI YGLRLIGLTF FHGKEPEEVH EAPVLMWLPY
TALALATIVL GTYFAVSIKF PLTEALVAVL LGFLTGFVLY IALPGFKSET LRPLWEFAYR
RFYLPILYDG VFPWLYTWFA KFIFVVFDKG LFDGLYHNVL PGLFGAVSNW LRRLVAGALN
IYLLYAIVGI LITLLLLVVA
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