| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0514 |
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| Symbol | |
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| ID | 4909191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 490249 |
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| End bp | 491466 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124261 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_001055408 |
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| Protein GI | 126459130 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAC CTATGAAGAT GGAGGAGTAT GGAATTGTCC TTAAGGAGGA GCGGCTGGAG
GGCGGCCGCA GAGTTCTCGA CATTTTTTGG GGGCCGCAAC ACCCCTCCTC TGGCCACACC
CGGTTTATAG TTGAGGTGGA TGGAGACATT GTAGTCAACG TGACCCCAGA CCCGGGCTAT
GTTCACAGGA CTATGGAGAA GCTGGGCGAG ACTCGTCATT GGATTCAAAA CATCCCCCTC
TTCGAGCGGC TTTCTCTCCC AGACGCCATT AACGTGACTT GGGCTTATGC GATGGCCATC
GAGCGGCTGG CCGGCCTCGA TGTGTCTCCA AGGGCACAGT ATCTGAGGGT AATTATGGGG
GAGCTGAGCC GTATCTCGAC TCACTTGTAC GACCTAGGCC TCCACGCCAT TATGATTGGG
TCATCCACGG GCTTTATGTG GGCCTACGGC CTACGCGAGC TGTTGGTGCA ACTGTGGGCC
ATGGTCTCGG GCTCGCGCAC GACGCCCACG TGGGTTCTGC CCGGCGGCGT GAGGACCGCG
CCTCCCGACG CCTTCTATGA ACAGACGCGG GGCTTCCTCC AATACCTTGA GAAAAAGATT
GATGAGTTTG TCAGAGTGGT GATTAAGAAC CCCGTCGGCT ATTACAGGCT TAAGGACGTC
GGCTACTTGA GCAAGGAAGA TGCGGCGCGG CTCATGGCCA CAGGGCCCGG CGCCAGGGGG
TCAGGCATAG ATTGGGACGC CAGGAGGGTA TATAGGTACG GCATATACGA CGAGTTTGAG
TGGGACGTCT GCGTCGAAGA TGGCGGCGAC TCGCTGGCCA GAGCTATGGT TAGGATCTGC
GAAATTATGC AGAGCGCACG TATTATTAGA CAGGCGCTGG ATAGGGCGCC CCGCGACGGG
CCTTTGGTGG GCGAATCCGT AGCGCACAGG ATACCGCCAA AGCAGAGGGA AAAGGTCAAT
GAGCTAGTGC GCCTTCAGGC ACTGTTTACA ATGATGTTGC CGCAGGGCGA GGGCACTGGC
ATCACTGAAG GCGGGAGGGG GCGCTACTAC TTCCACGTAC TCGGCGACGG ATCAGAGAAG
CCCTACCGCG TCCGCATAAG CACACCGTCA TGGCAGAACT TGAGAGCTAT GATAAAGGCC
TTCATAGGTG CGCGGCTCAT GGACCTCCCC GCGATATACG GCTCCTTCGG CTACTTCCCC
CCAGAGCAAG ACAGGTAA
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| Protein sequence | MFKPMKMEEY GIVLKEERLE GGRRVLDIFW GPQHPSSGHT RFIVEVDGDI VVNVTPDPGY
VHRTMEKLGE TRHWIQNIPL FERLSLPDAI NVTWAYAMAI ERLAGLDVSP RAQYLRVIMG
ELSRISTHLY DLGLHAIMIG SSTGFMWAYG LRELLVQLWA MVSGSRTTPT WVLPGGVRTA
PPDAFYEQTR GFLQYLEKKI DEFVRVVIKN PVGYYRLKDV GYLSKEDAAR LMATGPGARG
SGIDWDARRV YRYGIYDEFE WDVCVEDGGD SLARAMVRIC EIMQSARIIR QALDRAPRDG
PLVGESVAHR IPPKQREKVN ELVRLQALFT MMLPQGEGTG ITEGGRGRYY FHVLGDGSEK
PYRVRISTPS WQNLRAMIKA FIGARLMDLP AIYGSFGYFP PEQDR
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