| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0510 |
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| Symbol | |
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| ID | 4910279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 486578 |
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| End bp | 487903 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124257 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001055404 |
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| Protein GI | 126459126 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCAAGT GGCACTGGCC AATTGACCCA GACGAGGTGC CTAGGATAGT GGTCGAGCCT
CCGGGGCCTA AGGCGATGGA GATCGTGAGG CGAGACGAAG AACTGATAAT GCAGTCCTTT
GCCAGGTGGT ATCCGCTTGT AATTAAGCGC GGCTATGGCC CCGTGGTGGA GGACGTCGAT
GGGAACTTGT ACATAGACTT CAACGCGGGC ATAGCGGTGA CCAACGTGGG CCACGCGCAT
CCAAAGGTGG TCGAGGCCAT AAAGAGGCAG GCGGAGCTTT TTACCCACTA CTCTCTCACA
GACTTCTACT ACGAGGTTGC TGTTAAACTC GCCGAGAGGC TCGTCTCAAT AGCCCCCATA
TCGGGGAAGA AGAAGGTGTT TTTCACAAAC AGCGGCGCGG AGTCTATAGA GGGGGTGTTG
AAGATAGCTA GGGGGTATTT CAAGGGCCAG CGGCCCTACG TCATAGCGTT TCTAGGCGCG
TTCCACGGCC GCACCTACGG CGCAATGAGC TTAACAGCCT CCAAGCCGGT GCAACGGCGC
CACTTCTCCC CGCTTGTGCC GGGCGTGATT CATGCGCCGT TCCCCCACCC AGTCCACTGC
CCCTTCAAGG CCTCCACTCC GGAGGAGTGC GGCGAGTATG CCCTGGCCTT TCTAGAGGAC
TGGGTCTTCA AAAGGCTCGT TGACCCCTCC GAGGTGTCGC TGGTAATAGT GGAGCCTATC
CAGGGGGAGG GAGGGTACGT GGTCCCGCCG AAGAACTTTA TACAGGGGCT GAGAAAGCTC
ACGGCGGAGC ACGGCATCTT ATTCGCCGTG GATGAGGTAC AGACTGGCTT TGGGAGAACT
GGCCGGTGGT TCGCGGTGGA GCACTTCGGC GTGGAGCCGG ACTTGATGGC CACGGCGAAG
GCCATAGCAG CTGGACTTCC CCTTGGCGCA ATAATAGGCC GCGCCGACGT CATGTCGTTG
CCAAGGGGCT CCCACGCTAA CACCTTCGGC GGCAACCCAG TCGCCGCGGC CGCCGCCTTG
GCGACCCTAG AAGTGATAGA GGAAGAGGAC TTGCTAAGAC ACGCGGAGTC CCTCGGCGAG
GAACTAAAAA AGGTATTTAG AGAAGAGCTG GGGGAGGGCT ACGACGTGAG GGGGCTAGGC
CTAATGATTG GAGTAGAGAT GTTGAAAAAG TCTGATTTAG AGGGGGTATT GACCAGGGCG
TTTAAGCGCG GCGTCGCAGT TATAGGCGCC GGCTTCTCCA CAATCCGAAT AGCCCCGCCG
CTCGTAATAC CCCGCGAGAT GGCTCTCAAG GCTGCGTCAA TTATAATAGA CGTGGTAAAA
AGCTAG
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| Protein sequence | MPKWHWPIDP DEVPRIVVEP PGPKAMEIVR RDEELIMQSF ARWYPLVIKR GYGPVVEDVD
GNLYIDFNAG IAVTNVGHAH PKVVEAIKRQ AELFTHYSLT DFYYEVAVKL AERLVSIAPI
SGKKKVFFTN SGAESIEGVL KIARGYFKGQ RPYVIAFLGA FHGRTYGAMS LTASKPVQRR
HFSPLVPGVI HAPFPHPVHC PFKASTPEEC GEYALAFLED WVFKRLVDPS EVSLVIVEPI
QGEGGYVVPP KNFIQGLRKL TAEHGILFAV DEVQTGFGRT GRWFAVEHFG VEPDLMATAK
AIAAGLPLGA IIGRADVMSL PRGSHANTFG GNPVAAAAAL ATLEVIEEED LLRHAESLGE
ELKKVFREEL GEGYDVRGLG LMIGVEMLKK SDLEGVLTRA FKRGVAVIGA GFSTIRIAPP
LVIPREMALK AASIIIDVVK S
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