| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0499 |
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| Symbol | |
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| ID | 4908762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 478122 |
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| End bp | 479570 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124246 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001055393 |
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| Protein GI | 126459115 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGAAA GGCAAAGCGG CGAAAAGGTT GAGGAGTGGC GCCGCATTTT GGACTCCTTG
CGTAAGGCCG GCGTTGAGCC ATATCCGCAC AGCTTTTCCC CCACCCACAG CATAAAGGCC
TTAAACGAGC TTAGGCGGCA GGCGCTGTTG GACCCCTGGC TAGGCGCCGT GATAAGAGTG
GCGGGGAGGG TGACGGATGT TAGGAGGCAC CCAAACGTGG TGTTTTTAGA CTTGTACGAG
GATGGGGCGC GGTTTCAAGC CATGGCTGAT CCAAAGCTTC CCCTGTTGGA GCACATCTGG
CGGGGCGACT ACGTGGGCGT GGAGGGGCCT TTGGTTAAGA CGCAGAGGGG GGACTACGCC
GTGAGGGCGA CCTCTATTAC TCTATTGGCC AAGGCTGTTC AGCCCCTCCC CGAGTGGGGG
AAGGTAGATA GGGACTCGCC CTTCTACATG CGGTACAGGT CTGTGGCCAT GGTCCTCGAC
TTGCAGCTTA GGTGGCGTAT TGCGGCTAGG GCTAGGCTTA TACAAGCGTT TAGAGAGGCC
ATGTGGCGTA GGGGGTTTGT GGAAATTCCC ACGCCTGTCC TACAGCCCAT CTACGGCGGC
GCCGCCGCCA GGCCCTTTAC CACGAAGGTC TGGGCCATCG ACGAGGAGTG GTACCTCCGC
ATCTCCCCCG AGCTCTACCT CAAGCGCTAC ATAATCGCCG GCTTCCCCAA GGTCTTCGAG
ATAGGGCCTC AGTTCCGCAA CGAGGACATA GACGCGTTGC ACAACCCCGA GTTCTGGTCG
CTTGAGGCCT ATCAGGCATA CGCCGACTAC AGAGAGATCA TGAAGCTGAC GGAGGAGGTG
GTGTACGAGG CCATCGTCGC GGTCTTAGGC ACGCCGGTGG TTAAGTATAG GGAGTGGAGC
ATAAACTTCA GCCCGCCGTG GCGGCGCATA ACTCTCCACG ATGCGCTTAG GGAGTTCGGA
GGCGAAGACC CCGAGAAGTT GACCGACGAC GAGATTAAGC AGAGGCTTAG AGAGATGCAG
GTACCTCTCA AGGTCTACAA CCGCGGCGTA GCCCTCGTCA AGCTCTTTGA GAAGCTGGTG
GAGAAGAAGC TCGTGGAGCC CACCTTCGTC TTAGACTACC CAGAGGAGTC TACGCCTCTG
TGCAAGCCGC ATAGGGAGAA GAAGGGCCTT GTGGAGAGGT TTGAGGCGTT CGTAGGCGGC
CTCGAAATCG CCAACGCGTA CACAGAGTTA AACGACCCTG TGAAGCAGTA CGAGTACTTC
GTCCGCGAAG AGGAGCTGTT TCCCAAGGAT GAGGCGCACC CGCTGGACTG GGACTTCGTC
GAAGAGCTCT CCTTCGGCAT GCCTCCCACG GGCGGCGTCG GCATAGGAGT GGATAGGCTC
GCCATGATTA TCACCAACGC CGAGTCTATA AAGGACGTGA TCCCGTATCC CATTGTGAAA
AGAAAGTAG
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| Protein sequence | MSERQSGEKV EEWRRILDSL RKAGVEPYPH SFSPTHSIKA LNELRRQALL DPWLGAVIRV
AGRVTDVRRH PNVVFLDLYE DGARFQAMAD PKLPLLEHIW RGDYVGVEGP LVKTQRGDYA
VRATSITLLA KAVQPLPEWG KVDRDSPFYM RYRSVAMVLD LQLRWRIAAR ARLIQAFREA
MWRRGFVEIP TPVLQPIYGG AAARPFTTKV WAIDEEWYLR ISPELYLKRY IIAGFPKVFE
IGPQFRNEDI DALHNPEFWS LEAYQAYADY REIMKLTEEV VYEAIVAVLG TPVVKYREWS
INFSPPWRRI TLHDALREFG GEDPEKLTDD EIKQRLREMQ VPLKVYNRGV ALVKLFEKLV
EKKLVEPTFV LDYPEESTPL CKPHREKKGL VERFEAFVGG LEIANAYTEL NDPVKQYEYF
VREEELFPKD EAHPLDWDFV EELSFGMPPT GGVGIGVDRL AMIITNAESI KDVIPYPIVK
RK
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