Gene Pcal_0495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0495 
Symbol 
ID4909893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp474681 
End bp475079 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content52% 
IMG OID640124242 
Productputative transcriptional regulator 
Protein accessionYP_001055389 
Protein GI126459111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGTCTG CTGAGATAAG GCGGCGTATT GTTGAATATT TGAAGTCTGT GGGTAGTGCC 
TCTGTGTACG AAGTGGCTAA GGCCATTGGC CTCTCCTACG GCTCGGCGCA GTGGCATTTG
TACGTCTTGG AGCGGGAGGG CATCGTCTTC TCGGTGGCGA AGGGGAAGAA GAGGATTGTC
ATGCTTAAGG ACTCTTTGGA CGCGTATATT AAGACGCTTA AGGTTAGGGA CTTTTTTAGA
GATTTTTGGC AGTTGCTCAG GGAGTTGGGC ATTGAGAGCG ACATGGACGT GGTGGACGCT
TTGAAGATCC TCGAGGTGGA GCGGAGGGAG GTGGCGTCTT CTATTCTTTC CATTGCGAGG
AATTTGTATG AGGCTCGGCG TGGGCGAGGA CAAACTTAA
 
Protein sequence
MESAEIRRRI VEYLKSVGSA SVYEVAKAIG LSYGSAQWHL YVLEREGIVF SVAKGKKRIV 
MLKDSLDAYI KTLKVRDFFR DFWQLLRELG IESDMDVVDA LKILEVERRE VASSILSIAR
NLYEARRGRG QT