Gene Pcal_0466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0466 
Symbol 
ID4909358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp447464 
End bp447961 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content54% 
IMG OID640124216 
Producthypothetical protein 
Protein accessionYP_001055363 
Protein GI126459085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGATAG GGATAGCTCT TGCGCAGATT AAAGAGTTCG GCGAAAGGGG GACTTTCCCA 
GTCTACGTCG TCTACGGCCC CGAGGGGTGT GGCAAGACTG CCTTCCTCAA GCAGGCTAAA
GCCGTCCTTG AAGAGGAGTT TGGCTATCAC GTCATATACG CGAGCCCTCT GGCAGATGAT
GCGAAAGAGA TCTTGTACAC CCCCTCGATC CGCGAAATTG TCGAAGAAGT CTTAAAGGCC
CCTCCAGATC CCCGCCTAAA ACTCGTCGAC GTAGTTGTAG CTATCGTCAA AAGAGTTGTG
AGAAAGGTAA GGAGGCCCAA AATCGCGGTC CTCATGGACG ACGTATTCCA AGCGGTGGGC
CTAGACGAAG CGGAGAGATA CACAAAGACG TTGCTAAACC TAATAGAACA CCCACCAGAG
AAGTATGAAA AATCGTCGTC CTCGTCGCCT CCAGCGAGGG CGTTACATGG GAGCGCGTGG
GACGGCACAG CTGGGTAG
 
Protein sequence
MWIGIALAQI KEFGERGTFP VYVVYGPEGC GKTAFLKQAK AVLEEEFGYH VIYASPLADD 
AKEILYTPSI REIVEEVLKA PPDPRLKLVD VVVAIVKRVV RKVRRPKIAV LMDDVFQAVG
LDEAERYTKT LLNLIEHPPE KYEKSSSSSP PARALHGSAW DGTAG