| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0445 |
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| Symbol | |
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| ID | 4909219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 426994 |
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| End bp | 427929 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640124196 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001055344 |
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| Protein GI | 126459066 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTGT TCATAGACTA CCCAACTCTT GCAAGGGCTA TAATATTTTC AAACATATAC
GCATTGCTAG GCCTTGGGCT AAACCTCACT TACATCACTA CTAAGATACC GTCTTTTGCC
CACGGCGACT TGGCCACAGT GGGGGCCTAC GTGAGCTATT TCACCATCGT CTTCCTTCTC
GGTGGTGCTG CCGCAAGCGT CTACCTCTCT CTCCCTCTAG TAGTGCTGAT GAGCGGGGCC
GTCGCCGTGG CTACCTACAT CGCGGTTTTT AGGCCAATGA TTCGGAGGGG GGCTAGCATA
ACTGCGCTCA TGATCGCCTC CTTCGGCGTC CACTTTGTCC TCTTCTCTGC GGTGGCCATA
GCGGCGGATT ATGTGCAAAA TACGTACAAG GTGTTGACTA GGAACGTCTT GCTTGCAAAT
TACGAATTTG TGTGGCCTGG CACCGACTTC TTGACCTCCT CTCTCATAAA CACGTCGCTG
GCGGTGGCCG CGGTGTCGGC TCTGCTCTAC TTCATTCTCT ACAGAACTAG GTACGGAGTG
GTCATGAGGG CCAGCATAGA CAACATCTAC TTGGCCAAGG CTGTGGGGAT AAACGTGGAG
GCCGTCTTTG CCATTGCGTG GTTCTTAATA GGCGCCGTGA CCGGCCTCGC GGGGGTGTAC
ATGGCCATGT TCTTCCCCAT GACTGAGGAG CTGGGCTGGC TGAGGCTCGC CCTTGTCTTC
GTCGCATCTG TGGTGGGCGG TCTCTCCAAC ATATTCGGCG GCCTCTTAGG CGGATACGTG
GTGGGACTTA GCACAGTGCT AGGCGCAGCA TATATCCTGG CCCCCCTCAA CGTGCCCATA
GAGTTTCAGT TGATCATACC CTTCTCCATC GTCATTGTCA TTCTGCTATT CATGCCTCAG
GGACTTGTCT CACTCTTAAC CAAGCGGGGG AGGTGA
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| Protein sequence | MDLFIDYPTL ARAIIFSNIY ALLGLGLNLT YITTKIPSFA HGDLATVGAY VSYFTIVFLL
GGAAASVYLS LPLVVLMSGA VAVATYIAVF RPMIRRGASI TALMIASFGV HFVLFSAVAI
AADYVQNTYK VLTRNVLLAN YEFVWPGTDF LTSSLINTSL AVAAVSALLY FILYRTRYGV
VMRASIDNIY LAKAVGINVE AVFAIAWFLI GAVTGLAGVY MAMFFPMTEE LGWLRLALVF
VASVVGGLSN IFGGLLGGYV VGLSTVLGAA YILAPLNVPI EFQLIIPFSI VIVILLFMPQ
GLVSLLTKRG R
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