| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0444 |
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| Symbol | |
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| ID | 4909172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 425913 |
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| End bp | 426992 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640124195 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001055343 |
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| Protein GI | 126459065 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTCC AAATTGATGT ATTTATAAGA GAGACGGTCG CCATAGCGGC TATATACGCT
ATATACGTCC TCAGCCTCAA CTTAGAGGTG GGGTACCTGG GCCTGCCGCA GTTTGGCAAA
GTCATGTTCT TGGCGCTGGG GGCCTTCGCC GTTGGGGGAA TTGCCACTAA GGTTGCGCTC
CTCCTATACG GCGGCCTTAT ACAGAGCAGA CTTGGGATAA ACCCCCTGGC AAACCTCGAC
GCGTACTGCA CCGCCTATCA GTACCAGGCG GCCGATGTGA TAAAGGGGAT CTTCCTCTCC
AATCCCCTGG AGGCTGTGGC GTTCTTCCTT ATGGCTCTCA TCATAGCCGC CGCGTTGGCG
GGGGTGTTCG GCGTAGTGAT GAGTTGGCCG GCCATAAGGC TCCGCGAGGA CTACCTAGGC
ATTCTCCTCT TGGTGAGCGC CGAGACTATT AGAGTAATAA CCACCTACAC CCCCCAGTTG
GCCTGCGGGG TCTTCGGTGC CGTGGTGCCG GATCCCTTTG TGTGGATGGG GGAGCTCAGG
CCCTGGGGGT ACGCCCTCGT CGTCGTCTTG CTCCTCGTGT TGACCTTCTT CGTGGCGGAG
AGGCTGGGCA ACTCTCCCTT TGGCAGAGCG CTTAGGGCTA TCCGCGACGC AGAGACGGCG
GCTGCGGTAT TTGGAAAAGA CATAGTCCGC TTTAGGGTTA GAGTTTTGGC GGTCGCCTCG
GCGCTCAGCG GCGTGGCCGG CGCCCTCCTG GCTTTCTACA ACAACTTCGT AAACATGGGC
CAGTTTGTCC CACTCTACAC CTTCTACGCT TGGCTCATGT TGATCATTGG GGGCAGCGGC
AACAACGTGG GCGCGCTAGT TGGGGTAGGC ATATACTACG CCGCGGATAG GTTGTTGAGC
TTGTACAAGG AGGGGATTAG GCAGGTGGTC AACGTGGACC CCGTCTTCTT CCAGTACATG
GTCTTCGGCA TAGTCGTCAT CTTGGTGCTA ATGTTTATGC CGCAGGGCGT CGTGGCGGAG
CGGCCTGTGA AGACGCTGAA GCGGAGGAGG CTCGAGGAGC TCCGCAGAGA GGCGGCCTAA
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| Protein sequence | MFLQIDVFIR ETVAIAAIYA IYVLSLNLEV GYLGLPQFGK VMFLALGAFA VGGIATKVAL
LLYGGLIQSR LGINPLANLD AYCTAYQYQA ADVIKGIFLS NPLEAVAFFL MALIIAAALA
GVFGVVMSWP AIRLREDYLG ILLLVSAETI RVITTYTPQL ACGVFGAVVP DPFVWMGELR
PWGYALVVVL LLVLTFFVAE RLGNSPFGRA LRAIRDAETA AAVFGKDIVR FRVRVLAVAS
ALSGVAGALL AFYNNFVNMG QFVPLYTFYA WLMLIIGGSG NNVGALVGVG IYYAADRLLS
LYKEGIRQVV NVDPVFFQYM VFGIVVILVL MFMPQGVVAE RPVKTLKRRR LEELRREAA
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