Gene Pcal_0441 details

Gene Information

• Locus tag: Pcal_0441
• Symbol: argS
• ID: 4908910
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 422919
• End bp: 424808
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640124192
• Product: arginyl-tRNA synthetase
• Protein accession: YP_001055340
• Protein GI: 126459062
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0018] Arginyl-tRNA synthetase
• TIGRFAM ID: [TIGR00456] arginyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGACCCTC TACAGCCTGC TAGGGAGGAG TTTGGGAGAG TGGTGGCCGA GGTGGCGAAG 
CGGCTTGGCA TTGGCGAAGT GCCCGAGGTG GAGAGGGCGA AGAGGTTTGG CTACTTCACT 
GCGCGTTTCC ACAAGTACAA GGTGGATCCC GGGCAGTTGA AGGCGGCGGC GGAGGGGGAC 
TGGGGGCTTG AGTATCTGCA GTGGGTCTCT GCAGATGGCT TGTACCTCAA CGCGGAGTTG 
AACGTGGCCA GGCTGGCCGG GCTTGTGTTC GACGCAGTGG CTGAAATGGG CAGGCGTTAT 
GGGTCAGACG TATGTCCAGG GGGGTCCTTC CTCGTGGAGC ACACCTCTGC CAACCCCGTC 
CACCCTCTGC ACATTGGCCA TGGGAGAAAC GCCATTTTGG GCGACTCGCT GGCGCGGCTT 
TTGAAGTTCT GCGGCGCTAA GGTGGAGACG CACTTCTACG TCGACGACTG CGGCGTCCAG 
GTGATGTACG CAGCGATTGG CTACCGCGCC GTTAGGAAGG AGGCGGCGGA GGCCGTGGCT 
CGGGGGGCTA AGCCGGACTT AGTGGTGGGC TACATATACT CTGCCACAAA CGCCGTGGCG 
GAGATAAATA GACTGAAGAA GGAGCTGACG GCGGCGGGGG AGGAGGAGAA GAAGAGGGAG 
ATAATTGCAC AGATTGATGA GTGGGTGGCG GTCTTGAAGC GGCTGATGGA CGTGGAGGGG 
GGCCTTGTGA ACAAGGTGGT GGAGGTCCTT GGGCAGAGAG ATGTGGCTCA AGAGGCCGTG 
GAGCTCAACA GGAGGTACGA GGCCGGCGAC GCCGAGGCGA GGGAGGCCGT GAGAGAGGTG 
GTGGATCTTG TGCTGAGGGG TCAGAGGGAG ACTTTGGCGA GGCTTGGCAT AGAGATAGAC 
TACTGGGACT ACGAGAGCGA CATATCCGTC TGGTCTGGCG AGGCCATGAG GATTGTGAGA 
GAGTTGCAGA GGAGGTGGCC TCAGTATGTG GAAAACAAGG GCGGCGCCGT GGTGTTCCGC 
GCCGACAAAT TCGCGGAGGA CTTCAAGTTG CACGAGGTGT TGGACCTCCC CAAGTTCATA 
CCTCCCGTCA CTTTGACTCG GTCTGACGGC ACCACTCTCT ACGTCACGAG GGACGTGGCC 
TACGCTCTGT GGCAGTGGAA AAGGGGCTTG GGCAAGGTTA TTAGGGTGGT CTCCACGGAG 
CAGACCCACG AGCAGGCGCA CGTCCGCATA ATCCTCTACG CCCTAGGCCA CGAAGACGCG 
GCTAAGAACG TTGTACACTA CGCCTATGAA ATGGTCAACT TGCCGGGGGC GAAGATGTCC 
GCGAGGAGGG GGCAGTACAT CTCCCTAGAC GAGATTTTGG ACGAGGCGGC TGAGCGGTCC 
GCCGCCTTGG TGAAAGAGGC TAACCCAGAG GTGGCGGGAG TAATAGCCGA GAGGGTGGGC 
GTGGGCTCTG TGAGATATGC CTTCCTCTCC ACCGGTCCTA GGAAGCCCAT AGAGTTCAAG 
TGGGACGCCG TCTTGAACAT GCGCCAGAAC TCTGGCCCAT TCCTACAGTA CACGTATGTC 
CGCGCCTACT CCATACTGGA GAAGGCCCAG GCCCCGCCAG CGCGGCCTGA GATACCGGGG 
GAGATGTTGC CCGAGGAGAA GACCCTGGTG GTAAAAGTGG CGGAGTGGCC CACGGTCGTG 
AAAGAGGCGT TTCAAGCCCT CCGCCCAGAC TACGTCGCAG AGTACTTAGA CGGCCTCGCC 
CTAGTGTTCA ACAGCTACTA CGAGAAGGCG CCTGTGTTAA AGGCCGAGGA GCCGCTCCGC 
GGCTTTAGGC TGGCCTTAGT AAACGCGGTG AAGACGGTGT TGGAGGCAGG GTTCTACATC 
CTCGGCATAC CCACCTTGAC CAAGATGTGA 

 

Protein sequence

MDPLQPAREE FGRVVAEVAK RLGIGEVPEV ERAKRFGYFT ARFHKYKVDP GQLKAAAEGD 
WGLEYLQWVS ADGLYLNAEL NVARLAGLVF DAVAEMGRRY GSDVCPGGSF LVEHTSANPV 
HPLHIGHGRN AILGDSLARL LKFCGAKVET HFYVDDCGVQ VMYAAIGYRA VRKEAAEAVA 
RGAKPDLVVG YIYSATNAVA EINRLKKELT AAGEEEKKRE IIAQIDEWVA VLKRLMDVEG 
GLVNKVVEVL GQRDVAQEAV ELNRRYEAGD AEAREAVREV VDLVLRGQRE TLARLGIEID 
YWDYESDISV WSGEAMRIVR ELQRRWPQYV ENKGGAVVFR ADKFAEDFKL HEVLDLPKFI 
PPVTLTRSDG TTLYVTRDVA YALWQWKRGL GKVIRVVSTE QTHEQAHVRI ILYALGHEDA 
AKNVVHYAYE MVNLPGAKMS ARRGQYISLD EILDEAAERS AALVKEANPE VAGVIAERVG 
VGSVRYAFLS TGPRKPIEFK WDAVLNMRQN SGPFLQYTYV RAYSILEKAQ APPARPEIPG 
EMLPEEKTLV VKVAEWPTVV KEAFQALRPD YVAEYLDGLA LVFNSYYEKA PVLKAEEPLR 
GFRLALVNAV KTVLEAGFYI LGIPTLTKM