| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0435 |
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| Symbol | |
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| ID | 4908517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 420074 |
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| End bp | 420916 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124186 |
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| Product | 5'-methylthioadenosine phosphorylase II |
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| Protein accession | YP_001055334 |
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| Protein GI | 126459056 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0005] Purine nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTGTGA AACTGACTCA ACCGCCTAGG AGGCCTCAGG AGATAGGGTT TGACAGCTTC
CCCACTCTGG GCATCATTGG GGGCTCTGGG CTGTACGACC CTGGGATTTT TGAAAACGCC
GTGGAGGTAC AGATGCACAC CCCCTACGGG CTCCCCTCAG ACAACGTCAT CGTTGGCAGA
GTCGCCGGGC GGGTAGTGGC CTTTCTGCCT AGGCACGGGA GGGGGCACAA GTACCCGCCC
CACAAGATAC CCTACAGGGC CAACATATAC GCCCTCCACG CCCTCGGCGT CAAGTCCGTG
GTGGCGGTCA GCGCGGTGGG CTCGCTGAGG CCCGACTACG CCCCCGGCGA CTTCGTCGTC
CCAGACCAGT TCGTGGACAT GACCAAGGGG CGCGAGTACA CCTTCTACGA CGGGCCGCGG
ACGTGCCACG TGCAAATAGG CCTCGAGCCC TTTACACAGG AGATTCGGAA GGTGTTAGTG
GAGACTGCGT CGAAGTACAA CAAGACTCAC GACGGCGGGT GCTACATATG TATCGAGGGG
CCACGCTTCA GCACAAAGGC CGAGTCCCGC ATCTGGAGAG AGGTGTTTGG CTGCGACATC
ATAGGCATGA CGCTTGTCCC CGAGATAAAC CTAGCGAGAG AGTTGGGGAT GTGCTACGGC
CTAATAGCCC TCGTCACAGA CTACGACATA TGGGTCCCCC ACCAGCCGGT CACAGCCGAG
GCCGTGGAGA AAATGATGAC GGAAAAAATG GCGCTAATCC GCAAAGTAAT CGTCGAGGCG
ATTCCCAAGA TTCCTGAGGA GATTCCAAAA TGCGCAGAGA TTCTCAACTA CTCCTGCGTC
TAG
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| Protein sequence | MVVKLTQPPR RPQEIGFDSF PTLGIIGGSG LYDPGIFENA VEVQMHTPYG LPSDNVIVGR
VAGRVVAFLP RHGRGHKYPP HKIPYRANIY ALHALGVKSV VAVSAVGSLR PDYAPGDFVV
PDQFVDMTKG REYTFYDGPR TCHVQIGLEP FTQEIRKVLV ETASKYNKTH DGGCYICIEG
PRFSTKAESR IWREVFGCDI IGMTLVPEIN LARELGMCYG LIALVTDYDI WVPHQPVTAE
AVEKMMTEKM ALIRKVIVEA IPKIPEEIPK CAEILNYSCV
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