Gene Pcal_0434 details

Gene Information

• Locus tag: Pcal_0434
• ID: 4908259
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pyrobaculum calidifontis JCM 11548
• Kingdom: Archaea
• Replicon accession: NC_009073
• Strand: -
• Start bp: 419488
• End bp: 419886
• Gene Length: 399 bp
• Protein Length: 132 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640124185
• Product: translation initiation factor IF-5A
• Protein accession: YP_001055333
• Protein GI: 126459055
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
• TIGRFAM ID: [TIGR00037] translation initiation factor eIF-5A

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGACGA AGTATGTGGA AGTGGGAGAG CTCAAGGAGG GGTCCTACGT GGTCATAGAC 
GGGGAGCCTT GCCGTGTTGT TGAAATTGAG AAGTCGAAGA CGGGTAAACA CGGCTCTGCC 
AAGGCCAGGG TTGTGGCCGT GGGCGTCTTT GATGGGGCGA AGAGGACGCT CAGTTTGCCA 
GTGGATGCGC AGATCGAGGT TCCAATAATT GAGAAATTCA CGGCGCAGGT TCTCTCAATA 
TCGGGCGACG TGATTCAGCT CATGGACATG CGGGACTACA AGACCATTGA GGTGCCTATG 
AAGTACGTGG AAGAGGAGGC CAAGGGGAGA CTGGCTCCGG GGGCAGAGGT GGAGGTGTGG 
CAGATTTTAG ACCGCTTCAA AATAGTCAGA GTGAAGTAG 

 

Protein sequence

MSTKYVEVGE LKEGSYVVID GEPCRVVEIE KSKTGKHGSA KARVVAVGVF DGAKRTLSLP 
VDAQIEVPII EKFTAQVLSI SGDVIQLMDM RDYKTIEVPM KYVEEEAKGR LAPGAEVEVW 
QILDRFKIVR VK