| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0427 |
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| Symbol | |
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| ID | 4908325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 412104 |
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| End bp | 413243 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640124179 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001055327 |
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| Protein GI | 126459049 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTGTA AAACCGACAA GCTGATAGCG ACGGTAAAGG CCAAGGTGGA GCCGACGCCT
GAGCTGATTG AGCTACTGAA AAGATACCGC GACGGGCTGA ACATGGCGAT AAGGTGGGCC
GTGGAAGCGG CAAGGGCGAA GGGCCGCCCA CCGACGCTAT CTAAAATATA CAGGGCCGTC
TACGAGCAGT TGAGGACCAT GGGACTGCCG TCTTACATAG CCTCTGCGTG TTATAGGGAG
GCCTTAGCAA TAGTGAGGTC GTACTTGGCC AGCGGAGCTA GGGGAAGGAT GCCGGTGGTG
AATACTTTGC ACATGTGGCT TCACAAGAAT GCGTACCGTG TCAGAGACGG CTACCTATAC
GTCACGGGTG GATACAAGGC AAGAGTGGTA GGCATAGAGG AGAAGTACAA GGAAGGAGAG
TGGAAAGAGG CTAAGCTGGT GTACCGCGGC GGCGATATGT ATCTGTACAT AGCGGTGGAG
GTGCCGAAGC CCATGCTTGT TAAGCCAAAG GGCGTAATCG CCGTCGACAT AAACGAGCGG
TATGTCTACT ACGGCAATTC GCAGTGGGTG AAGAAGGTGG AGACGCCGGT GGAGAAAGCC
ATGCGACTGA GAGAGCTGGC TGAGAAACTA CAGAGGAGGT ACTCGGCGCC GCGCTACACG
CCGTGGAATA GGAGAGGCGG CATAAGAGAG AGGATACGCC GCTTGCACAA AAAAGCGAGA
GACATCGTGG AGGACTGGGC GAAGAAGACT GCGAAAAGGA TTGTAGAAGA GGCAAGGGAG
AGGCAGTATG CGGTGGCAGT GGAAGACTTG ACAGGCCTAA AAGAGGCAAT AAGGGAGCTG
ACAAAGGAAC ACCGCGTGGG ACTAATGCTG TTAGCATACC GACGCCTGCT ATGGTGGATG
AAATGGCAGG CAGCTAAGCG TGGCGTAGTG GTAGTAGAGG TGGAGCCGAG AGGCACATCT
ACGACCTGTC CCAAATGCGG CGGGAAGATG GAAGAAGTGG GCCATAGAAG AGTGAAATGC
GTCAAATGCG GCTTTGAGGC TGGGAGAGAC ATAGTTGCGA TATACAACAT CGAAAAGAGA
GCCCGCGAGA AGTTGGGTAA CCCCTCTTTT TCCCCACTGG CGGTCTTAAC GCCGAGTTAA
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| Protein sequence | MACKTDKLIA TVKAKVEPTP ELIELLKRYR DGLNMAIRWA VEAARAKGRP PTLSKIYRAV
YEQLRTMGLP SYIASACYRE ALAIVRSYLA SGARGRMPVV NTLHMWLHKN AYRVRDGYLY
VTGGYKARVV GIEEKYKEGE WKEAKLVYRG GDMYLYIAVE VPKPMLVKPK GVIAVDINER
YVYYGNSQWV KKVETPVEKA MRLRELAEKL QRRYSAPRYT PWNRRGGIRE RIRRLHKKAR
DIVEDWAKKT AKRIVEEARE RQYAVAVEDL TGLKEAIREL TKEHRVGLML LAYRRLLWWM
KWQAAKRGVV VVEVEPRGTS TTCPKCGGKM EEVGHRRVKC VKCGFEAGRD IVAIYNIEKR
AREKLGNPSF SPLAVLTPS
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