| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0413 |
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| Symbol | |
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| ID | 4909478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | + |
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| Start bp | 396026 |
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| End bp | 397549 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640124165 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001055313 |
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| Protein GI | 126459035 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.939018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGCGC CGTGGTTCAT GTTCAAATTT TTATGTGGTG TACGATTTGT GAGAACTCTA
TTGGCATTGG TGGGCTTGGC TCTGCTCTTC CTGGGCCTCG CCTCTCTGGG GCCTGCCCCG
TCTCCCTCTT CTGCCTCTGT CCTGCCTCTG CCTGGGTCGT CGCAGTTTAG CCCGCCCGTG
GTCTCTGTGT CTGGGGGGCT GTACTTCAAG GCGTGGATGT ACGCGAGGGG GACTGGGGGC
GTCATGTATC TGCGCTGTCT TGTGTTTGAC AGCTATGTCG ATGGGGCGTG GAGCCGGGCG
GCGGGGGACT CCTTCGCCGT GGGGGCTGGG GTAGTCACTG TGGGGAGCCC CGCCTCGTTT
GGGGGCGAGG TAAACCTCTC TGCTCCTCTC ATGGGCGGCT GCGTCCCCGT GGCCACGCCC
TCTGTGGACG GGCTTGTGCT GGGGTCTGTC CGCGTGGTTG CGCCCGGGGC CTCCCTGGCC
GCGTCTAAGG AGGGCCTCTT TGTGGTAGCC ACAGGCGGCT CCGTGGGCAG GGCGGCGTCG
TACTACGGCC CCGGCGCCCC CCAGCCCCCT CCCAGCGGCG TCTACTTAGA GGTTCCGCCG
GGCCTTGCGC CGGTGCTTAA GTCCATAGCC GCCAACGTCA CCGCCGGTTG TGCAGATGCG
GCGTGTAAGG TGGCCAAGAT TAAGGAGTTT CTCTCCCACT TCCGCTACGA CGGCACTATG
GACTCTCTCT GGCCCAGCGT CCCGCCGGGG GTAGACCCAG TCCTCTGGTT TCTGCAGGAG
GGGAGGAGGG GGGTGTGTAT ACACTTCGCC TCTGCCTTTG TCCTCTTGGC CAGGTCGGCG
GGGGTCCCCG CGAGGCTTGT GGTGGGGTAT GTCTCCGATG GCCCAGTGCC GGGGGACTGG
GCGTTGACGG CCTTTAGCCC CCACGCCTGG GCTGAGTACT ACGTCGAGGG CGTTGGGTGG
GTCGGCGTTG AGGCCACGCC GCCGGGCTCT GCCCCGCAGT CTCTCCCCGT CGTGCCTCTG
CGGCCTGAGG CCGTTCAGCC TCCTCCGCCT GGCCCCTCTC TGCCTCAGCT GGCCGCGCCG
CAGGTGCCGG AGGTCCCCTG GCCCGTAGTC GCTGTGGCGG CCGCGGCGGT GGGGGCCTTG
GCCTACTTCT CGGCGGGTAG GAGGGCGGCC ACGGTGGGAG TTGGCGAGGA GTTTTTGGTG
GAGGGCCCTA GGGGGTTCCC CGTGTATGTG GGGAGGAGGC GGGTGGGGAG GGCGCCCGTC
GCTGTCGTCT TTCACAGGCC GGGGCTCTAC GTGGTGCGGG CTGGGCCTCT GGTGTACTTG
GTCAGAGTGG TGGACTACAG GAGGGTGGCG GGGGCCCTCT TTGTGAAACT GCTGAGGCGG
CTTGGCCTCC CCGCCACTAC TACGCCTAGG GAGCTCGCCG CGGCTAGGCC GGAGTTGAGA
GAGTTGGCGC TGGCCTTTGA GAGGGCGCTC TTCGGCCCCG CCGTGTCTAA GGGCGACGTA
GAGGCGCTGA GGAGGGCGCT ATGA
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| Protein sequence | MKAPWFMFKF LCGVRFVRTL LALVGLALLF LGLASLGPAP SPSSASVLPL PGSSQFSPPV
VSVSGGLYFK AWMYARGTGG VMYLRCLVFD SYVDGAWSRA AGDSFAVGAG VVTVGSPASF
GGEVNLSAPL MGGCVPVATP SVDGLVLGSV RVVAPGASLA ASKEGLFVVA TGGSVGRAAS
YYGPGAPQPP PSGVYLEVPP GLAPVLKSIA ANVTAGCADA ACKVAKIKEF LSHFRYDGTM
DSLWPSVPPG VDPVLWFLQE GRRGVCIHFA SAFVLLARSA GVPARLVVGY VSDGPVPGDW
ALTAFSPHAW AEYYVEGVGW VGVEATPPGS APQSLPVVPL RPEAVQPPPP GPSLPQLAAP
QVPEVPWPVV AVAAAAVGAL AYFSAGRRAA TVGVGEEFLV EGPRGFPVYV GRRRVGRAPV
AVVFHRPGLY VVRAGPLVYL VRVVDYRRVA GALFVKLLRR LGLPATTTPR ELAAARPELR
ELALAFERAL FGPAVSKGDV EALRRAL
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