| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0406 |
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| Symbol | |
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| ID | 4909280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 389128 |
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| End bp | 390135 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640124158 |
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| Product | AAA ATPase |
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| Protein accession | YP_001055306 |
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| Protein GI | 126459028 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.518516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAGC TGGCTGAGGT GGTGCGCGAA GGGCTTACCC TTATCTACGG CCCTCCCGGT
GCCGGGAAGA CCTCCATAGC GATGAGACTT GCCGACACTG TGGGCAACAG GGTGATGTGG
ATATCCACGA CTGAGGGGCC CAACTTTCTA ACCCTCGCGG CGAAGCGGGT GGGGGCCAGC
CCGGAAAAGT TCGCCTTCTT GGACTTCCCC AGGGCCTTTA GGGAGGACAT TGCCAAGTAT
GTGCTGGAAC ACGCCCACGA GTACGACGCC GTGGTCGTCG ACTCAGTGAA CGGCCTGGCC
TCCTCTATTC CCTCGCTGGA GAAGCTGGCC CACTCTGTCT TCTACCAAAT CTCGAGGGAC
CGGCCGGTCA TCCTCGTGGC TGAGGAGGAG CCCCGAAACT TACACTACAT AGCGGACCAC
GTAGTCCACG TGTGGTATAA GATAAACAGC GTAGGACATT TAATCCGCTA TTTCCAGCTG
GAGAAGTCCC GGAAGAGACC CCCTGGCCCC CGCTACATAT TTGACATAGT AGAAGGTGAG
GGGATAATAT ACATAACAAT GGCTGGCACC CGCGGACACC AGGAAATCAT CATAGACGAC
AAGCTTGGAG TTGAGGTCCC TCTAAAAAGC ACGATTTGTT TAGGAGCACC TAGTGTGAAA
AAAGTGGTGA AGATTCTATC AAATATCAAA GATGAGGCTA TTTTCCTACA GATAGGTCCG
TGGACCTCGT ACAGGGGTCT AGAAATTAAA AGCGACCAAG AAGTAGTTGT ATCAACATTT
CACACATTCT TCGAGTTATG GAATAGACTG GAACGGAGAG AACTACCTAA TGTGAGGTAC
CTAGTGGTAA GCGGTCTCCT CAACCTCAGC GAAGATGAGA TTTATGACTA TTTTTACATC
CTCTATGCAT TTCAAGATTA TGTTGACTTC TTAGTTATTG TGAATATTGG CTCTTCTGAA
GAGCTGGAAA AATTAGAGAA GTATTGCGCT GAAAGTGTAC GGTTTTAG
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| Protein sequence | MSELAEVVRE GLTLIYGPPG AGKTSIAMRL ADTVGNRVMW ISTTEGPNFL TLAAKRVGAS
PEKFAFLDFP RAFREDIAKY VLEHAHEYDA VVVDSVNGLA SSIPSLEKLA HSVFYQISRD
RPVILVAEEE PRNLHYIADH VVHVWYKINS VGHLIRYFQL EKSRKRPPGP RYIFDIVEGE
GIIYITMAGT RGHQEIIIDD KLGVEVPLKS TICLGAPSVK KVVKILSNIK DEAIFLQIGP
WTSYRGLEIK SDQEVVVSTF HTFFELWNRL ERRELPNVRY LVVSGLLNLS EDEIYDYFYI
LYAFQDYVDF LVIVNIGSSE ELEKLEKYCA ESVRF
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