| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0405 |
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| Symbol | |
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| ID | 4910145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 388001 |
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| End bp | 388873 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640124157 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001055305 |
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| Protein GI | 126459027 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1831] Predicted metal-dependent hydrolase (urease superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.487045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCTTTG ATAACCATGC TCATGCGAAT GAGGTGGCGG GGCTTGGGGC TGTGGAGGTG
GTTAGGCGGT TTAAGGCGGC TGGTGGGATT GGCATTGTGT TTGTGTCTTT GTTGACTTGG
TCTATTGGGG GGCGGCCTGG GGATAGGGAT TGGGTTGCTA GACTGTACGA CCACACGGTG
GGGAATGTGG GGGTGGCTAG GGGGGCTGGG CTTGTTTCTG GGGCTGTTGT GGGGGTCCAC
CCGGCGGAGT GTGTGAGGCT TTTGGAGGCT GGGTGGGGGG CGGGGGAGGT GGAGGAGTTT
ATGCGGTGGG CTGTGGACCT GGCGGCGAGG TATGTGGAAG AGGGGAGGGC GGTTGGGCTG
GGGGAGTTTG GGCGGCCTCA CTGGCCTGTG GAGAGGGGGG TCGTGGAGCT GTGTAACAGG
GTCCTCCTCT ATGTGTTGGA GCGGGCGCGG GACGTGGGCG CGGTTGTTCA CCTACACTTG
GAGCGTAGTG GCGCGGCGAC TGTGGCCTCG GTGGCTGAGC TGGTCAAGAG GGCGGGGACG
AGGCCGGAGC GGGTAGTCAT GCACCACATC GAGGGGGCCT TGGCGGGCTA TGCGTGGTCT
AGGGGCCTCT CCCCTTCTGT CCCCTTGGGG AGGAGGGGCG AGTTTGAGGA GGCGCTGAGG
GCTGGCCCCG TCTTTGTGGT GGAGAGCGAC TACATTGACG ATAGGTCGAG GCCTGGCGCC
GTGATCCCCC CGTGGACTCT CGTGTCGAAG CTTAGGCAGT ATGTACAACG CGGCGTTCTC
TCGGTGGATG ATTTGTACAA GATCTCCGTG GAGAACGTGA GGCGTATATA CGGAGACCGC
CTGCCCTTGG ACAACGTGGA GATAAAGATC TGA
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| Protein sequence | MVFDNHAHAN EVAGLGAVEV VRRFKAAGGI GIVFVSLLTW SIGGRPGDRD WVARLYDHTV
GNVGVARGAG LVSGAVVGVH PAECVRLLEA GWGAGEVEEF MRWAVDLAAR YVEEGRAVGL
GEFGRPHWPV ERGVVELCNR VLLYVLERAR DVGAVVHLHL ERSGAATVAS VAELVKRAGT
RPERVVMHHI EGALAGYAWS RGLSPSVPLG RRGEFEEALR AGPVFVVESD YIDDRSRPGA
VIPPWTLVSK LRQYVQRGVL SVDDLYKISV ENVRRIYGDR LPLDNVEIKI
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