| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0402 |
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| Symbol | |
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| ID | 4910066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 384708 |
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| End bp | 385955 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640124154 |
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| Product | VWA containing CoxE family protein |
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| Protein accession | YP_001055302 |
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| Protein GI | 126459024 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.30475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCCTGC TTCTCAACGT GGACTACGGG GACTCCCTCT CTCTGGCGCG GGGGCGCGAC
GTCTTGAGGC GGGCCGGGGT CAAGGCGGTG GGGGTGGAGG AGGCCGTGGA CGCGTACTAC
TTGCACTACA GGAGGCCCAT CTTTGGGGGG CGGGCGGGGA ACGAGGTCTG GGCGAGGTTT
GTCCGCCTCT ACGTAAATTC GTCTTACTAC TCGGCGGTTG CCCCCCTCTG TAGGCTCAAC
CACAGGGCCT CTCGGGAGGC CGCCGTGAGG CTTCTAAGGG CATTTGAGTC GTACCTCCTC
TCGCTTGAGA GGAGGGGCAG GGCGTGGTTT GGGAGAGGGA GCCAGGAGGC GTGGGTTGAG
GCCATGCGGC AACTGAGGAG GCTCTTCGGC GACCCAGCCG ACGTGTCTGA GCTACACCGT
GTCTTTAAAA AGCTGGGCGA GGTGTTGGGC AGGGGGAGGA GGGGCGACCC CGCCTCCCTT
GCCCTCTCCA CCGCCTCCGA CCCCAGGAGG GCCCGCCTGG CCTCCCTTCT CGCGAAGGCC
GTGGACCTCT CCGCTCTCTT GGGAGACCCT CTGGGCGACG TGGGGAGGGT GGAGGGGCCT
GGGGCAGAGT TTGAGGTGGC TCACGGCTCT TTTGCCAGAG TTAAGAGGGC TGTGGCATAC
GCCAGGGCCC TCTTCGTGGG GGCGCTCCCC GTGTTTCTCC ACAAGGCCGC CTCTTCTACT
TTGCCCGTGA GGAGGCCCAG GGCGAGGGGG GACAGCGGCG TATTCCTCTT AGTGGACAAG
TCTGGCTCTA TGTACAGCGC GGTGGGGGGC GTGGAGAAGA TCGCCCTCGC CACTGCCTTC
GCCTTGGCTG TGCTTAAGCG GTACAAGAGG GCGAGGCTTC GGTTTTTCGA CGTGGAGGTG
CACAGAGTGG AGGAGCTCGG CGACTTGGTG GACGTCCTCT CTAGGGCGTG GGCGGGCGGG
GGGACTGACA TATCTAGGGC GGTGGAGGCC GCGGCTGAGG AGGCGGCGAG GGAGAGGTTG
AGGGGGTACA GCCTTGTGGT GGTCACAGAC GGGGAAGACG ACGCCTTCTC CCCCGCGGCG
GCTAGGGAGG CCAGGGCCGT CTTTAGAGAG GTCCTCTTCG TCGTCGTGGG GGAGAGGCGG
CTAAGCGGGG TTAGGCAGGT GTTTCTGCGC CCTCCGCCTC TTGCAGCCGC CGCGCCGCAG
GCGGCCTACG GCTTTTTGGC AAACACTGGG CGGGGGTCCA CCTTGTAG
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| Protein sequence | MGLLLNVDYG DSLSLARGRD VLRRAGVKAV GVEEAVDAYY LHYRRPIFGG RAGNEVWARF
VRLYVNSSYY SAVAPLCRLN HRASREAAVR LLRAFESYLL SLERRGRAWF GRGSQEAWVE
AMRQLRRLFG DPADVSELHR VFKKLGEVLG RGRRGDPASL ALSTASDPRR ARLASLLAKA
VDLSALLGDP LGDVGRVEGP GAEFEVAHGS FARVKRAVAY ARALFVGALP VFLHKAASST
LPVRRPRARG DSGVFLLVDK SGSMYSAVGG VEKIALATAF ALAVLKRYKR ARLRFFDVEV
HRVEELGDLV DVLSRAWAGG GTDISRAVEA AAEEAARERL RGYSLVVVTD GEDDAFSPAA
AREARAVFRE VLFVVVGERR LSGVRQVFLR PPPLAAAAPQ AAYGFLANTG RGSTL
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