Gene Pcal_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0401 
Symbol 
ID4909560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand+ 
Start bp384190 
End bp384750 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content63% 
IMG OID640124153 
Productflavin reductase domain-containing protein 
Protein accessionYP_001055301 
Protein GI126459023 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.181273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTCCG GCAGTCTGGT CAAATACGAA GGAAAGTTCT ACAGGCTGTT GCACCCTAGG 
CCGACGCTGG TGATTGTGTC TAAGTGCCCT GGGGGCAGGG TGAACCTCAT GCCGGCCTCG 
TGGAATACTC CCGTGAGCGA GGACCCGCCG ACGGTGGCCG TGGCGGTGGA CAAGTCGGCC 
TACACCCACG AGTGCCTCCA GTACCACAAG AGGGCCACTC TCAACGTGTT GCCCATAGAT 
GCCGCCGATT TGATATACCG CCTGGGCTCC GTCAGTGGGC GAGAGATGGA CAAGTCCGCG 
GCCGTGAAGC TGGAGCCCTC GCAGTACGTG GACGTGCCCA GGGTGGCCGG GGCCCTCGCC 
GTCTACGAGG CCGAGGTGTA CAAGGAGGTG GAGGTGGGCG AGGTAGTGTT GTACATATTC 
CGCGTGGTTG CCACGTGGGC CGCGGCGGGC GTGGCGGACC AGTGGGGCTT CGACTTCAAA 
AAGGTGAATA TACCGCTCCA CGGGGCTGGG AGAGCCTTCT ACAAGGTGGA CCCCCGCCCA 
GTGTTTGCCA AAAAGCCGTA G
 
Protein sequence
MESGSLVKYE GKFYRLLHPR PTLVIVSKCP GGRVNLMPAS WNTPVSEDPP TVAVAVDKSA 
YTHECLQYHK RATLNVLPID AADLIYRLGS VSGREMDKSA AVKLEPSQYV DVPRVAGALA 
VYEAEVYKEV EVGEVVLYIF RVVATWAAAG VADQWGFDFK KVNIPLHGAG RAFYKVDPRP 
VFAKKP