Gene Pcal_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcal_0398 
Symbol 
ID4909653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum calidifontis JCM 11548 
KingdomArchaea 
Replicon accessionNC_009073 
Strand
Start bp383001 
End bp383399 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content57% 
IMG OID640124151 
Producthypothetical protein 
Protein accessionYP_001055299 
Protein GI126459021 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0722893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTGA CTATGGAAGA GAAGCCGGTC TTTGAAACAA ATTTGCCGCC AGACAAGGTC 
AAGAAGCTTA TAGAGGTTTT GAGGGAGGTG CACGACCCCG AGATTCCCAT AAACGTGTAC
GACCTAGGCC TCATCCGGAA GGTGGTTATG GAAGACGGCA AGGTCAAGGT GGTTATGACT
CTCACGGCGG TGGGCTGCCC AGTGGCCGGT AGCGTGGCAG AGACTGTGGG CTACGCCGTG
CAGTCCGTCC TCCCCGAGGC AGAGGACGTG GAGGTTGAGG TGGACTTCGA GAGGCCGTGG
GACCCCACGC AGATGACGCC CCAGGGCAGA GAGATGTTCA AGGCCATATA CGGCTACGAC
ATCGTCGAAC AGTACCTCCA GGCACAGGCG GAGAGTTAA
 
Protein sequence
MEVTMEEKPV FETNLPPDKV KKLIEVLREV HDPEIPINVY DLGLIRKVVM EDGKVKVVMT 
LTAVGCPVAG SVAETVGYAV QSVLPEAEDV EVEVDFERPW DPTQMTPQGR EMFKAIYGYD
IVEQYLQAQA ES