| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_0377 |
|---|
| Symbol | |
|---|
| ID | 4910058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pyrobaculum calidifontis JCM 11548 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009073 |
|---|
| Strand | + |
|---|
| Start bp | 362305 |
|---|
| End bp | 363297 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640124129 |
|---|
| Product | aspartate kinase |
|---|
| Protein accession | YP_001055278 |
|---|
| Protein GI | 126459000 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCCGG TGGTAAAGAT AGGGGGCTCC CTTCTCCGCT CCGCCGACGA CTTCATAAGG
GCGGCCAAGT TCCTGGCAAG CTATGAGAGG CCCCCCATAG CGGTTGTGTC GGCGGTTAAA
GGTGTGACAG ACATGTTGCT GGAGCTCTAC AAGACTAGGA GCTACCTAAT GTTCGAAGAG
GTGGCCCACA GGCACATCTC CATCGCCAGG GCCCTGGGCG TGGAGGACGA GGTGGCGCCG
CTTTTGAGGG AGCTTGAGGC CGCCCTTCAA CTGCCGAAGG AGCCCTGGGC CGTGGACTAC
TTCGCCTCAT TCGGCGAGAG GCTTTCAGCC ACCATACTGG CAAGTGTCGC GAGGCGAATG
GGCATCGCGG CCAAGTTGTA CATAGCGCCT ATAGTCACCG ACAGCTCCTT TGGAAACGCC
ACCCCCATCC GCTTGGACTA CGCCGACGAG CTTAGGGAGG GGGACGTCTT GGCGGTGGTG
ACTGGGTTTA TCGGCCGAGA CAGAGAGGGC AGATTTACGA CGGTGGGGCG CGGGGGGAGC
GACTACACAG CCACCTACAT AGGCAAGGAG ATAGGGGCCA GAAAGGTCTT CCTAATCACA
GACGCCCCAG GGGTCATGAC GGCGGACCCG CGAGAGGTTG AGGAGGCGGA GGTCCTCCCC
CTCATGTCTA TCTACGAGGC AGTGGCCGCG GCTCAGGCTG GCGCGAAGAA CTTCCACCCG
CGCACCTTCC AGCCGGTCCT AGAGGCGGGG AACATGGCCG TAGAAGTGAG GAGCTACCAC
AGCCGGGGCA CTCTAATAGG CCACATATAC CCCCCGCCAC CCTACAAGGT TGTTACGAGG
TGCGGACAGG GGAGTTGTGT GGTGGGCCTA GCCGCGGAGG AGTTGACCAA GCTAGGCGGC
GTCTCCCTAG GGCGTTACAC GTGCCGCCTC GACATTCCGC CTAGGCAGGC CCACGAGCTT
TTGGTAAAGC CGTATATAAA GTATATAAAG TAG
|
|---|
| Protein sequence | MRPVVKIGGS LLRSADDFIR AAKFLASYER PPIAVVSAVK GVTDMLLELY KTRSYLMFEE
VAHRHISIAR ALGVEDEVAP LLRELEAALQ LPKEPWAVDY FASFGERLSA TILASVARRM
GIAAKLYIAP IVTDSSFGNA TPIRLDYADE LREGDVLAVV TGFIGRDREG RFTTVGRGGS
DYTATYIGKE IGARKVFLIT DAPGVMTADP REVEEAEVLP LMSIYEAVAA AQAGAKNFHP
RTFQPVLEAG NMAVEVRSYH SRGTLIGHIY PPPPYKVVTR CGQGSCVVGL AAEELTKLGG
VSLGRYTCRL DIPPRQAHEL LVKPYIKYIK
|
|---|
| |